Shewanella sediminis: Ssed_3134
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Entry
Ssed_3134 CDS
T00596
Name
(GenBank) inner-membrane translocator
KO
K01998
branched-chain amino acid transport system permease protein
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
sse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_3134
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ssed_3134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3134
Transporters [BR:
sse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Ssed_3134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Deltameth_res
Motif
Other DBs
NCBI-ProteinID:
ABV37738
UniProt:
A8FY15
LinkDB
All DBs
Position
complement(3782879..3783952)
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AA seq
357 aa
AA seq
DB search
MSSLAMRPCGDFRTSYKKDNTIFETKTIRLVAILAIAAACLAPLVLDGYFLTLFIQISYL
GIAALGLNILVGFTGQISLGHGAFFGFGAFASAWLNTSFNIPVALCIPMAGFLTMAVGMM
FGMPAARIKGLYLAIATLAAQFIIEDFFARAEWFSGGSSGSMAAPVNLLGFEFDTDQSFY
YIALFALVFMYIWGCNLMRSRDGRAFVAVRDHYLSAEIMGVKLNKYRLLSFGISSFYAGI
GGALYAHYLGYVSAEGFTIFMSIQFLAMIIIGGLGSIKGTLMGVIFMVLLPEMLETGVGL
MKYTDWGNIPMVTDGLAYIKEMAIGLVIILFLIFEPEGLAHRWAQIKNYWKFYPFSY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtttggcaatgcgtccatgcggggatttcaggaccagttacaagaaagacaac
acgattttcgaaaccaagaccatacgtttggtggccatcctggccatcgcagccgcttgt
ctggcaccgcttgtcttggatggttactttttaaccctatttattcagatctcttatctg
ggaatagcggcgctgggactcaatatcttggtgggtttcaccggacagatctccttgggt
catggtgccttcttcggcttcggcgcatttgcatcggcctggctcaacaccagctttaat
atcccggtagccctgtgtatccctatggcgggtttcctgactatggcggtcggcatgatg
tttggcatgcctgctgcgcgtattaaggggctttacctggcgatagctacattggcggct
cagtttattatcgaagacttttttgctcgtgccgagtggttctccggtggttcatcgggc
tctatggcggcgccggtgaacctcctggggttcgagtttgatacagaccaaagcttttac
tatatcgccctgtttgccctcgtcttcatgtacatctggggctgtaacctgatgcgcagc
cgtgatggtcgtgcgtttgtggcggtacgcgaccactatctttcggccgagatcatgggg
gtgaagttaaacaagtatcgcctgctgtcattcggcatctcctcattctatgccgggatc
ggcggcgcgttgtatgcgcactatcttggctatgtttcggcagaagggttcaccattttc
atgtcgatacagtttctggccatgatcatcatcggtggcctggggtcaatcaagggaact
ctgatgggggtcatcttcatggtgttactgccggagatgttggagacaggtgtcggtctg
atgaaatacaccgactggggcaacatccctatggtgaccgatggtctggcttatatcaag
gagatggcgatcggcctggtcattatcctgtttcttatttttgagccagaggggcttgcc
caccgctgggcgcaaataaagaactattggaaattctatccgttctcttattaa
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