Shewanella sediminis: Ssed_3153
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Entry
Ssed_3153 CDS
T00596
Name
(GenBank) surface antigen (D15)
KO
K07277
outer membrane protein insertion porin family
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sse03029
]
Ssed_3153
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3153
Mitochondrial biogenesis [BR:
sse03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
Ssed_3153
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_3153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
ABV37757
UniProt:
A8FY34
LinkDB
All DBs
Position
complement(3808498..3810981)
Genome browser
AA seq
827 aa
AA seq
DB search
MRFNKLFASMVLVGASLSGNGWAETFQPFEVTDIQVQGLQRVALGAALLTIPVKVGDTVD
QVKLQQAIKSLYASTNFEHIEVSRDGGVLVVTVKERPTISTVTFEGNKDIKDEQLQESLD
GSGVKVGESLDRTMLSGIEKSLQDFYYGVGKYGAKVEAQVINLPRNRVELKFNFTEGLAA
EIKQINVVGNEVFSDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETVKSFYHNRGY
IRFDVTSTQVAMTPDRKGLYITINVDEGEQYKVTEVNLTGDLMGREKVMKGILPIKEGDM
YNGADVTFAEEMYGKYLGRFGYAYPEVKTYPEINDETKEVTLNVNIQPGKRVYVRNINFS
GNQVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGYFETVDTETVQVPGTDDLVDVA
FNVKEQPSGSFNAGVGYGTESGLSLQFGVQQSNFLGTGNQAGINLNTNKYSKNVNVSYTD
PYFTKDGVSLGGSIYWNEFDAHEANLERYKNSSYGIALNSGFPINETNRINGGIGYRHNS
ISEISAYEQALRFYNIYRDSDDPNADLAFNNFEANLGWYRSTLNRGTFPSDGSSQRLSTK
ATIPGSDLQYFKADFDTSFYFPINRSHSFVMLTKARVGYGNGYGQFNDNDQILPFWENYY
SGGSSSLRGFKSNSVGPRSFYLYRGSEPCSPDPSGSGCYLPGDPNQIQVSDGRSIGGNAI
ATASIEMIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDSYRYLPAHEFDKLEDYADP
SRIRASAGMSVQWLSPMGPMVFSLAWPIKEYEDDETEIFSFNIGKTF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagatttaataaactttttgcctcgatggtattagtcggtgcgtctttatcagggaac
ggttgggcagaaacattccaaccttttgaagtaaccgatatacaagtgcaagggttacag
cgtgtagctcttggtgccgcgctactgaccattccagttaaggtcggtgatacggttgat
caagttaaactccaacaagcaattaagagcttgtatgcctcgactaacttcgaacatatc
gaagtgagtcgtgatggcggtgtattggtggtcacggtcaaagagagaccgacaatcagt
accgtgacatttgaaggcaacaaagatatcaaagatgaacagcttcaggagagtctggat
ggctccggggtcaaggtcggtgagtcattagaccgtaccatgttatcgggtatcgagaag
agtcttcaggatttctattatggtgtgggtaaatacggagctaaagttgaagctcaggtt
attaacttgcctcgtaatcgtgtagagctaaagttcaactttactgaagggttagccgca
gagatcaaacagatcaacgtcgttggtaatgaagtcttctccgatgctgaacttatcggc
atgctggaactaaaagactatgtcgcctggtgggatctgttcggtgagcgccgctatcag
aaacagaaacttcaagccgatctcgagacggtaaaatctttctaccataaccgaggttat
attcgcttcgatgtcacctcgacacaagttgcgatgacgcctgaccgtaagggtctctat
atcactatcaatgtcgatgagggcgagcagtataaggttacagaagttaacctgactggc
gacctgatggggcgtgagaaagtgatgaagggtattcttcctattaaagagggagacatg
tataacggtgccgatgtgacatttgccgaagagatgtatggcaagtatctgggccgtttc
ggttatgcctacccggaagttaagacctacccggaaattaatgatgagactaaagaagtt
actcttaacgttaatattcaaccgggtaaacgcgtctatgtacgtaatatcaacttttcc
ggtaaccaggtcaccaaagacgaagtaatgcgtcgtgagcttcgtcagatggaaggtgcg
tggttaaactcggcacaggttgagcaatctaaagcccgcctgaaccgtttaggttatttt
gaaaccgtagataccgaaacggttcaagtaccaggtaccgatgatctggtcgatgttgcc
ttcaatgtaaaagagcagccatcgggttcatttaatgccggtgtcggttatggtactgaa
tcagggttgagtctgcagtttggtgttcagcagagtaacttcttaggtacgggtaaccaa
gcgggtattaacctaaatactaacaagtattcaaagaacgtgaatgtctcttataccgac
ccatactttaccaaagatggtgttagtttaggtggtagtatttactggaacgagtttgac
gcgcatgaggccaacctcgagcgttataagaacagctcttatggtattgcgcttaactct
ggtttccctatcaacgaaaccaatcgaattaacggtggtattggctatcgtcataactcg
atctctgagatctcggcttatgagcaggcgctgcgcttctataatatctaccgtgactca
gacgatccgaatgccgacctggccttcaataacttcgaggctaacttaggttggtaccgt
agtacgcttaaccggggtaccttcccatcagatggttcatctcagcgcttgagcactaag
gcgacgataccgggttcagatctgcaatactttaaggcagattttgataccagcttctac
ttcccaatcaaccgtagtcacagctttgttatgttgactaaggctcgtgttggttacggt
aatggttatggtcagtttaacgataacgatcagatattacctttctgggaaaactattac
tcaggtggtagtagttccttacgtggcttcaagtctaactctgtaggcccacgttcattc
tacctgtatcgaggtagtgagccatgttctccggatccttcgggttcgggctgttatcta
ccgggcgatccaaaccaaattcaggtcagcgatggtcgctcaattggtggtaatgcgatt
gcaacagccagcatagagatgattgtgccaacgccatttttggatgaggcttataccaat
tcagtacgtaccagtttcttcgtcgatgccggtaacgtatgggataccgagtttgattat
gactcataccgttatcttcctgcacacgagtttgataagcttgaagattatgccgacccg
agccggatccgcgcatctgcgggtatgagcgtacagtggctgtcaccgatgggacctatg
gtgtttagtcttgcttggccaattaaggaatacgaggatgatgagactgagatcttctcg
ttcaatattggcaaaactttctaa
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