Shewanella sediminis: Ssed_3218
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Entry
Ssed_3218 CDS
T00596
Name
(GenBank) putative TonB-dependent receptor for Fe
KO
K02014
iron complex outermembrane recepter protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3218
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_3218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABV37822
UniProt:
A8FY99
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Position
complement(3904199..3906745)
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AA seq
848 aa
AA seq
DB search
MMNTRFQPDGLALAIALALTSSNLYAETSEVTQIDANVEKMSVLGSRVSSRTATESAVPV
DIISAESLSRGGFTELGQSLQASVPSFNFSRTQVSDGSDLFRPATLRGLQPDQTLVLING
KRRHNQAIFGLNGTVGAGAAGTDMNAIPLIALKDVQVLRDGAAAQYGSDAIAGVINLSLK
DTTGETTGYLQGGTTGEGDGDNYSIGLNTGFDLGDDGGFINLSLEYRDADGTNRAQPDIG
GSSTIAPGTLSDDVRWGQGNAASEFESVFYNAMMPVGDVELYSFGGYSNRTALGNGFWRN
FDEAAKNIAQVYPDGFLPRIYNEAQDISVAAGIRGDINDDWLFDVSGVYGQNRYDFDSRD
SINASYAAEYLHNNPGATDEDIAANSGPTSGYSGGFHFDQTTFNADVSGFVEIGRDAPLY
VAFGTEYRTENYEIVAGELASYSCGISNADSAFPSVMDPDVYAGCGFQAYPGLRPDAAGQ
ADRNSYAFYLDLETQLTDTWSLGTAARFEEFSDAGSDLVWKVSSRYEVTDDFALRGAVST
GFRAPSLQQSAYTAYTTNLGPGGVLSDSFTATAGSDFPSALGVDSLDLETSENLSLGFVF
NATDAISVTLDAYKVKIKDRITLGSLLSADDVAFSPDAMAALNATGADQANYFSNSVNST
TQGVDLIVTYRTDLFDGDFNATLAGNLNETEIDSVNAADGIPEDVALDDLQRSFLTDGQP
KQRATLTFDYSRNDWRGMLRANYFGETNVTYFGNDHIGLPDELSPTGSFLPTSVVEAAVL
VDINLEYQFTESLSVSAGINNIFDVTPDELGANESLDFITNQAFQYPVRALPYGFDGTTY
TAKVNFSF
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacaagatttcaaccagatgggttagcgctggccatcgccttagctttaaca
agctcaaacctttacgcggaaacatccgaagtaacacaaatcgatgcgaacgtggaaaag
atgtctgtacttggaagccgggtatcgagccgtacggcgactgagtcggctgttcccgtc
gatattatcagtgccgaaagcctaagccgtggtggctttaccgaattgggtcagagcctg
caggcgagtgttccctcatttaacttcagccgcactcaagtctccgatggctccgatctg
tttcgcccggcgacactgcgcggactccagcccgatcaaaccttagtgttgattaatggt
aaacgtcgtcataaccaagctattttcggcctcaatggcacagttggcgcaggcgcagcg
ggtactgacatgaatgctatcccgcttatcgcactgaaagatgtgcaggtactgcgtgat
ggcgcagctgcacaatatggctctgatgccatcgcaggggtgattaacttatcactcaaa
gacaccacaggtgagacgaccggttaccttcaaggtggcacgacgggcgaaggcgatggt
gacaactattctatagggctcaataccggtttcgatctcggtgatgacggcggctttatc
aacctgtctcttgagtaccgtgatgccgacggcactaatcgtgcccagcctgatattggt
ggttcttctaccatcgcgccgggtaccctgtccgatgatgttcgttggggacaaggtaac
gccgcttccgagtttgaatcagttttttataatgccatgatgccggtgggcgatgtcgaa
ctctactcttttggtggctactctaaccgtacggcgctgggtaatggtttctggcgtaac
ttcgatgaagcggctaaaaatatagcccaggtgtacccggatggcttcctgcctcgtatc
tataatgaagcgcaggatatctctgtcgccgcaggtatacgtggtgatatcaacgatgat
tggctgttcgatgtttcgggtgtttatggtcaaaaccgttatgattttgattccagagat
agcataaacgcttcctatgcggccgagtacctacacaacaaccctggtgcaacggatgaa
gatatcgcggccaactccgggccaacatcgggttattccggtggtttccattttgaccag
accacatttaatgccgatgtctcaggctttgttgagataggtcgcgatgctccgctctat
gttgcgttcggtaccgaataccgcaccgaaaactatgaaattgttgccggtgaattggcc
tcatattcttgcggtatctctaatgccgatagcgcctttccgtcggtcatggatccggat
gtctatgctgggtgtggatttcaggcatacccaggcttgaggcccgatgccgcaggtcag
gccgaccgtaacagctatgccttctatctggatctcgagacccagttaaccgatacctgg
tctctgggcacggcggctcgattcgaggagttctccgatgcgggcagcgatctggtgtgg
aaagtctcatcccgctatgaagtgaccgatgactttgcccttcgtggcgcggtgtctacc
ggttttcgggcgccatccttgcagcaaagtgcctatacggcttacaccaccaacttaggt
ccgggtggtgtactgtctgactcatttactgctaccgcaggttcagattttccgtcggcc
ttaggggtcgacagcttagaccttgaaacctccgaaaacttaagtcttggcttcgtcttc
aatgcgaccgacgcgatctcggtgaccttagatgcatacaaggtcaagattaaagacagg
atcaccttgggcagcctgctctcggccgatgacgttgcctttagccccgatgccatggcg
gcattgaacgccacaggcgccgatcaagctaactacttctcaaactcggtcaactcgacg
acgcaaggtgtcgatctgattgtgacctatcgtactgacctgtttgatggcgacttcaat
gccacgctggcagggaacctcaatgaaactgagatagacagtgtgaatgcggcagacggg
atccccgaggatgtggcgctggacgaccttcagcgtagcttcttaaccgatggtcaaccg
aagcagcgtgctaccttaaccttcgattacagcaggaatgattggcgcggtatgctcaga
gctaactacttcggtgaaactaacgtgacttacttcggtaacgatcatatcggtctgccc
gatgagttatcgccaacaggctcgttcctacctaccagcgtagtggaggctgccgtgctg
gtggatatcaatctggagtaccagttcaccgaatccttgagcgtctctgcgggcatcaat
aacatcttcgatgtcaccccagatgagctgggggcgaatgaatcgctcgatttcatcacc
aatcaggcctttcagtacccggtgcgcgcactgccttacggcttcgacggcacgacctac
acggcaaaagttaactttagcttctag
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