Shewanella sediminis: Ssed_3226
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Entry
Ssed_3226 CDS
T00596
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K02182
carnitine-CoA ligase [EC:
6.2.1.48
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Ssed_3226
Enzymes [BR:
sse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.48 carnitine---CoA ligase
Ssed_3226
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DNA_primase_lrg
Motif
Other DBs
NCBI-ProteinID:
ABV37830
UniProt:
A8FYA7
LinkDB
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Position
complement(3915951..3917504)
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AA seq
517 aa
AA seq
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MDIVGSKTIRCMWEERARKYSDNTALVFEDAAGDVRELTYSALNNEINKAANLFLQLGIN
KGDKVAVQLYNSPQFIFCWFGLAKIGAVIVPINTQYVYGECKYIINKCDVKAVVIEEEFL
PTFKRIEQDDDNSVNNILVTRVVSSDISNAINFDLLLSQQSTQLEKMVPLSSDDVVEILC
TSGTTSRPKGVEITHCNLLFAGYYTAWQTNLRADDTYLTMMPSFHIDFQCNAAMAAFTVG
ARLVMLEKYSARKFWKQVCDYRATITHSMPMIVRTLMLQPVMPNEREHCLRDMLFFMHIS
DQEKLDFETRFKVELFNSYGMTETLVGLIGDTPGEERHWPSIGRPGLSYEAKITDENGNE
VAPNIVGDLRVKGVPGRTILKGYYKDPEATAEVLTADGWLYTGDKGYVDERGLFYFVDRK
TNMIKRSGENISSSEIEKALMSHPDILDAAVIGVPDHIRDEAVKAFVIFNEGVSLSIDEI
LNYCSENMAKFKVPSFVEIRESFPRTCTCKIDKKLLA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgttggtagcaaaacaataagatgcatgtgggaagagcgtgcgcgtaaatat
agtgataacacagcgttagtttttgaggatgctgctggcgatgtccgagagttaacttat
agtgcactgaacaatgaaattaacaaggccgcaaatctattccttcaattaggtattaat
aagggggataaagtagccgtacagttatataacagccctcaatttatattctgttggttt
ggattagcaaaaattggcgccgttatcgttcctattaatacacaatatgtctatggggaa
tgtaaatacatcatcaataaatgtgatgtaaaagcggtggttattgaagaggagtttctg
cctacctttaaaagaatagagcaggatgacgataattcagtaaataatatcttagtgaca
agggtggtaagttcagatatttcgaatgccattaattttgatctgcttttgagccagcag
tctactcagttagagaagatggtgcccttaagcagtgacgatgtagtcgaaattttatgt
acttcaggcacgacctccaggcccaagggcgtggagatcactcattgtaatctactgttt
gcgggctattacacggcttggcaaaccaacttgagagccgatgacacctatttgactatg
atgcccagctttcatatcgattttcagtgtaatgcggctatggcagcgtttaccgttggt
gcgcgtctggtcatgcttgagaagtacagtgcgcgtaagttctggaagcaggtttgtgat
tacagggccactatcacccacagcatgccgatgatagtacggaccctgatgttgcagccc
gtaatgcccaatgaacgcgagcattgtctgcgtgatatgttgttttttatgcatatttca
gatcaggaaaaattggatttcgagacgcgattcaaggttgagctgtttaattcctatggt
atgacagagaccttagtcgggctgattggcgacacgccaggtgaagaacgtcactggccg
tccatcggcaggcccggactatcttatgaggccaaaattacggacgaaaatggcaatgaa
gttgcgcctaatatcgtcggcgatttgcgggtcaaaggtgttcccgggagaaccatactc
aagggttactataaagatcccgaagcgacggcagaggttctgactgccgacggttggctc
tacaccggtgataaaggttatgtcgatgagagagggttattttattttgtcgatagaaag
acaaatatgattaaacgctccggagagaatatttcaagcagtgaaattgaaaaagctctt
atgtcgcatcccgatattttggatgcagcagttatcggcgtacccgatcatattcgtgat
gaagcggttaaagccttcgttatttttaacgagggagtgtccttgagtatcgatgaaatt
ctaaattattgttctgaaaatatggcgaagtttaaagttccatctttcgttgaaataaga
gagtcattcccaagaacctgtacttgtaaaatagacaaaaaacttcttgcgtga
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