Shewanella sediminis: Ssed_3265
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Entry
Ssed_3265 CDS
T00596
Name
(GenBank) conserved hypothetical ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sse03009
]
Ssed_3265
Enzymes [BR:
sse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Ssed_3265
Ribosome biogenesis [BR:
sse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ssed_3265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF5818
PROCT
Motif
Other DBs
NCBI-ProteinID:
ABV37869
UniProt:
A8FYE6
LinkDB
All DBs
Position
complement(3964436..3965134)
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AA seq
232 aa
AA seq
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MRLDKFLCKSTELTRIEATALIVAGEVLVNGQTVTSASTQVHENNRITLDGQVLTPRASR
YIMMHKPLDTLSSNVDGDYPSVMNCLDVDKVCDLHIAGRLDADTTGLVLVTDDGRWSFNI
INPKYHCEKVYRVSLRDPINDDVAGKFACGVQLQGEASLTLPAKLEVVSPTEVLLTITEG
RYHQVKRMFAAVGNRVNGLHRQQVGDIKLDIGLGQWRYLTTEEINSFSVLQL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttgataaatttttgtgtaagagtactgaactgactcgcattgaggcgacggca
ttaattgttgctggtgaggtgctcgtcaatgggcaaactgtcacatcggcgtcgactcag
gtgcatgaaaataaccggatcaccttggatgggcaagtgctcaccccacgagcctcacga
tatatcatgatgcacaagcccctcgatactctcagctcaaatgtcgatggcgattatccc
tctgtgatgaactgcctcgatgtcgataaggtgtgtgaccttcatattgccggacgttta
gatgccgataccacaggtttagtcttggtcaccgatgatgggcgttggtcgtttaatatt
attaaccctaagtatcattgtgaaaaagtttatcgggttagtttgcgcgatcctattaat
gatgatgttgccgggaaatttgcctgcggggttcagcttcagggggaagcgtcactgact
ctaccggcaaagcttgaggtggtgagcccaacagaggtgctattaaccatcacggaaggc
agataccatcaggtaaagcgcatgtttgccgccgtggggaatcgggttaacggcctgcat
cgacagcaagttggcgatatcaaactggatattgggctcggacagtggcggtatctgaca
actgaagagattaactcattttccgtgctccagttatag
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