Shewanella sediminis: Ssed_3333
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Entry
Ssed_3333 CDS
T00596
Name
(GenBank) multi antimicrobial extrusion protein MatE
KO
K26937
MATE family, multidrug efflux pump
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3333
Transporters [BR:
sse02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Ssed_3333
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ABV37937
UniProt:
A8FYL4
LinkDB
All DBs
Position
complement(4049933..4051279)
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AA seq
448 aa
AA seq
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MSADVSSQDQALVNDPIHKLFWRYTIPTIASMLVTGIYVAIDGMFIGHYLGETGLAGMIL
AYPIGAVLYAIGALFGMGGAALVSINLGQGEVAKARKILGNTFSLCLISGTVFALFGTRY
SRELLQLLGAEGEVLNSAYDYLFWYFALGYFPIISMAFSALLRNDGRPGFVTYVLILGGC
LNAVLDWLFIVVFPFGLVGAAIATMISQAVTGLLCLQHFFTANTRLRINWQQMSLKLDHC
LNILRVGLPSFLLSLYLTIVLTLHNMAFLWVGTPIHVAAYGVVSYTEAFFYLIFEGIAFG
TQPIFSFNAGAGRYDRVFKTLKIAFGIALVTAFVGLLFIYIKPFWMVYIFAGDNPQLTPY
AIEGMRLYFWGLPMEGLLLVGASFFQAINCSREASMLTGMKLVLIALVICLFAWAFGVKG
VWVSLACCSTILVCWMMFALKRVSARLN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgatgtgtcttcccaagaccaggctttagttaacgatccaattcataagctt
ttttggcgatataccattcccactattgcttcgatgttggtgacggggatctatgtcgct
atcgacggcatgttcattggtcattacctgggagaaaccggtctggctgggatgatactg
gcttatcccatcggtgctgtactctatgccataggcgccctgtttggtatgggcggtgcg
gcgctggtttccataaatttaggtcagggagaagttgctaaggctcgaaaaatactcgga
aatactttcagtttatgccttatttcaggaactgtttttgctctatttggaacccgttac
tctcgtgaactgttacaacttctgggggcggagggagaggtattaaacagcgcctatgat
tacctcttttggtattttgctctcggctattttcctataatctcgatggccttcagcgct
ttattaagaaatgacggcaggccaggtttcgtcacttatgtgcttatcttgggtggctgt
ctgaatgcggtattagactggctgtttatcgtcgtttttcccttcgggttagtgggggcc
gccatcgcaaccatgatttcgcaagcggtcaccggcttactctgcttacagcatttcttt
actgctaatactcgtttacgtattaactggcagcagatgtcgcttaaactcgaccattgc
ctgaatatcctcagggtcggtctgcctagttttctgttgagcctctacctaacgatagtc
ttaacgctgcataacatggccttcttgtgggtcggtacgcctattcatgtggcggcttat
ggtgtggtgagttataccgaggcatttttctaccttatttttgaaggcatcgccttcggt
actcaacctatcttcagttttaatgcgggtgccgggcgctatgacagggtctttaaaacc
ttgaaaattgcgtttgggatcgccttggtaacggcttttgtcggtttattgttcatctac
atcaagcccttttggatggtctatatctttgccggtgataacccgcaactaaccccctat
gccatagaggggatgcgactctacttctggggcttgccgatggaggggctgctattggtc
ggggcgagttttttccaggcgattaactgctccagagaagcctccatgttgaccggcatg
aagcttgtcttaatcgctttagttatctgtctgtttgcctgggcattcggcgttaaggga
gtctgggtctctctggcgtgttgcagcacgatattggtgtgttggatgatgttcgccctg
aaaagggtatcggcacgattgaattag
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