Shewanella sediminis: Ssed_3370
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Entry
Ssed_3370 CDS
T00596
Name
(GenBank) Methylated-DNA--(protein)-cysteine S-methyltransferase
KO
K04485
DNA repair protein RadA/Sms
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_3370
DNA repair and recombination proteins [BR:
sse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ssed_3370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
nSTAND3
Rad51
AAA_18
AAA_19
AAA_14
NPHP3_N
CobU
DUF7125
RecA
AAA_30
AAA
AAA_11
cobW
AAA_16
ABC_tran
AAA_23
Zeta_toxin
Zn_ribbon_8
HypA
Motif
Other DBs
NCBI-ProteinID:
ABV37974
UniProt:
A8FYQ1
LinkDB
All DBs
Position
complement(4103992..4105365)
Genome browser
AA seq
457 aa
AA seq
DB search
MAKIKTAYVCNECGQDFPRWQGQCSACHEWNTITEVRLGAVKSAGASVSGYAGAVGGGSK
KLNEVKEVEAEKMLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP
SLYCTAEESLSQFKNRVNRLKLSCNEDNLYLMAETSVEAIIAELEAKQVKFAVIDSIQAV
VTDLANGSPGSPSQVKSSAQSLTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQVRTLRANKNRFGDVDTVGIFKMTERGMLSVDNPSEIFLSGSTTQSPGAAITCI
RKGNRNLLLEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEVFIPFRNYHKSMEGLGAKINPVKTIHELLELIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattaaaacagcatatgtgtgtaatgaatgtggtcaggactttcccaggtgg
caaggccaatgcagtgcatgtcatgaatggaataccatcaccgaagttcgcctaggtgcg
gttaagtctgccggcgcttcggtgtcgggttatgccggtgcggttggcggtggctcaaaa
aaactcaatgaagttaaggaagttgaagccgaaaagatgctgaccggcataggtgagctg
gaccgcgttctgtgcggcgggttaactaccggctcggtgaatattatctccggcgacccc
ggggcgggtaagaccaccatactgtccgatctcgtctctcgcatgtcacagttgatgccg
tcactctactgtacagccgaagagtcgctgtcacagtttaaaaaccgtgtgaaccgtctt
aagctgagctgtaatgaagataacctgtacctgatggcggaaacgagcgtcgaagccatc
attgccgaactcgaggcaaagcaggttaagtttgcggtgatagactcaattcaggcggtc
gtcaccgacctggctaatggcagcccgggttccccttcgcaagttaaaagcagcgcccag
tcactgacgcaatactgcaagcagaataacgtcaccatgttccttgtggcgcatgtgaat
aaaaataatgaaaccgccggcccacagaccttgattcatatcgtcgactgtcttacccac
ctggagtgcaacgacggtcaggtgcgtaccctcagagccaataaaaaccgtttcggggat
gtcgacaccgtcggtatcttcaagatgaccgagcgcggcatgctcagtgtcgataacccc
agcgaaattttcctctccggctcgacgactcagtctccgggagcggctatcacctgtatc
cgcaaaggcaaccgtaacctgctgcttgaaattcagtgcttaaccaccgaaaccgagggg
gagttcccccagcgcgtctgtgtcgggcttaatatgaaccgtattaagatgctgacgggg
atcttgcgtaaacacaccaagacgaagatttttcacgatacctatttcaacttagtcggc
gggctcaaaatcgatgagtcagaaacttgtatcgatctggcgttggtcacagcactgcta
agcagcctaaatgatttcgttgtcccaagaaccacctgcatcatgggggagctgagtctg
aatggtgatgtccgcccgatagatagtggcgtgccgcgggtgaaagaggccgttcaacat
gggttcaccgaagtgtttatccctttccgtaactaccacaagtcgatggaagggctaggg
gctaagatcaatccggtaaagactatccatgagttgcttgagttaataaattaa
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