Shewanella sediminis: Ssed_3404
Help
Entry
Ssed_3404 CDS
T00596
Name
(GenBank) carbamoyl-phosphate synthase, small subunit
KO
K01956
carbamoyl-phosphate synthase small subunit [EC:
6.3.5.5
]
Organism
sse
Shewanella sediminis
Pathway
sse00220
Arginine biosynthesis
sse00240
Pyrimidine metabolism
sse00250
Alanine, aspartate and glutamate metabolism
sse01100
Metabolic pathways
sse01110
Biosynthesis of secondary metabolites
sse01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ssed_3404
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ssed_3404
00220 Arginine biosynthesis
Ssed_3404
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Ssed_3404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase
CPSase_sm_chain
Peptidase_C26
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
ABV38008
UniProt:
A8FYT5
LinkDB
All DBs
Position
complement(4149970..4151127)
Genome browser
AA seq
385 aa
AA seq
DB search
MEVALTKSALLVLEDGTVFSGTAIGADGHAVGEVVFNTSMTGYQEILTDPSYSRQIVTLT
YPHIGNTGTNDEDTESDSVHARGLIIRDLPLIASNFRNKQSLSDYLKANNIVGIADIDTR
KLTRILREKGALAGCILVGEQDVAKALAEANAFPGLKGMDLAKEVTTETSYQWRSGSWRL
VGGLPDDTPESELKYKVVAYDYGVKRNILRMLVDRGCDVTVVPAKTPASTVLAMNPDGIF
LSNGPGDPEPCDYAIAAIQEILKTDIPVFGICLGHQLLALASGAKTSKMKFGHHGANHPV
SNIEQGNVMITSQNHGFAADEDSLPDNIKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEAS
PGPHDAAPLFNHFIELIELYRQHAK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgcgttgacaaagtctgccttactcgtactcgaagatggaactgtattctct
ggcacagcaattggtgccgatggacatgctgttggtgaagtggtttttaacacttcaatg
accggataccaggagatactgactgatccgtcttattctcgtcaaattgtaactctaacc
tatcctcatattggtaacacaggtaccaatgatgaagatacagaatctgattcagttcat
gctcgtggtctgattattagagatcttcctttaattgctagcaactttcgtaataagcaa
agcttaagcgattatcttaaagccaacaatattgttggtattgcagatatcgatacacgt
aagttgacccgtattttgcgggaaaaaggagcattggctggatgtattctggtcggtgaa
caggatgtggctaaggctcttgccgaagcaaacgcatttcctggtttaaaaggcatggat
ttagccaaagaagtaacgactgaaaccagttatcagtggcgaagtggaagctggcgttta
gtcggtggtctgccggatgatacgcctgaatctgaattaaaatacaaagttgtagcttat
gactacggtgtgaaacgtaatattttacgtatgcttgttgaccgtggttgtgatgtgacg
gttgtacctgcaaaaactcctgcatcgacagtgttagccatgaatcctgatgggatcttc
ctatcgaatggacctggcgatcctgagccatgtgactatgccattgctgcaattcaagag
atcttaaagacggatatcccagtctttggtatctgtttgggtcaccagctgttggcatta
gcctctggagctaaaacttctaagatgaagtttggtcaccatggtgctaaccaccccgtc
agtaacatcgagcaaggtaacgttatgatcaccagccagaaccacggttttgcggcggat
gaggatagcctacctgataatattaaagtgacacataagtcgctgtttgatggttcactg
caaggaatacatttgacggataagccagcctttagcttccagggacaccctgaagcgagt
ccgggtccccatgatgccgctcctttgttcaatcattttattgagcttatagagctgtat
cgtcaacacgccaaatag
DBGET
integrated database retrieval system
