Shewanella sediminis: Ssed_3450
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Entry
Ssed_3450 CDS
T00596
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sse
Shewanella sediminis
Pathway
sse00541
Biosynthesis of various nucleotide sugars
sse01100
Metabolic pathways
sse01250
Biosynthesis of nucleotide sugars
Module
sse_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Ssed_3450
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sse01005
]
Ssed_3450
Enzymes [BR:
sse01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Ssed_3450
Lipopolysaccharide biosynthesis proteins [BR:
sse01005
]
Lipid A
Ssed_3450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABV38054
UniProt:
A8FYY1
LinkDB
All DBs
Position
complement(4200701..4201549)
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AA seq
282 aa
AA seq
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MSNKIIGLGSIEIANDKPFVLFGGMNVLESRDLAMKIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKSTFNLPLITDVHEVHQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTDAIINVKKPQFLAPHEMRHIITKFNEAGNDKIILCERGSSFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRSDSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLEAYLTQMKAVDDLVKSFDAIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatcataggtctgggttcaatcgagattgcaaacgataaaccttttgtg
ttgtttggcggtatgaatgtactcgagtcgcgcgatttagcaatgaagattgctgaaact
tacgccgaagtgactcaaaagcttggtattccttatgtttttaaagcgtctttcgataag
gctaaccgctcttcagtaaattcataccgtggtccgggaatggaagaggggttgaagatt
ttcgaagagataaaatcgacctttaatctccctcttatcaccgatgttcatgaagtacac
cagtgtgccccagtggcagaagtggtcgatattatccaattgccggctttccttgctcgt
caaacggatctggttgtggcaatggctaagaccgacgccatcatcaatgttaagaagcct
cagttcttagcgcctcatgagatgcgtcatatcattactaagttcaatgaagccggtaac
gataagatcatcttgtgtgaacgcggcagtagcttcggttataacaacctagtggttgat
atgttaggcatggacgagatgaagcagtccggttacccggtgatcttcgatgcgactcac
gcactacagcgcccgggcggacgaagcgacagcgctggtggtcgtcgtgctcaggctaca
gaacttgcccgtagcggtatggcacttggcttggctggtctgtttatcgaagcgcatcct
gatcctgataatgctaagtgtgatggcccgtgcgcactgccacttcatcagttagaggcg
tatctgactcagatgaaggcggtcgatgacttggttaaatcattcgatgcgattgatacc
agtaagtag
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