Shewanella sediminis: Ssed_3468
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Entry
Ssed_3468 CDS
T00596
Name
(GenBank) Aminoacyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sse03012
]
Ssed_3468
Enzymes [BR:
sse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
Ssed_3468
Translation factors [BR:
sse03012
]
Eukaryotic type
Release factors
Ssed_3468
Prokaryotic type
Ssed_3468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
ABV38072
UniProt:
A8FYZ9
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All DBs
Position
complement(4223761..4224345)
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AA seq
194 aa
AA seq
DB search
MSNIKLIVGLANPGDKYAQTRHNAGAWYVQELARVCGATLVADSKYYGLTARVTLHGKDV
RLLIPSTFMNLSGKSVGALANFFRIEPEEILVAHDELDMQPGVAKFKLGGGHGGHNGLKD
IIAKLANNKGFYRLRIGIGHPGDKNQVSNYVLGKAPASEQTLIETVIDEAVRSTELLFNE
DMAKAMHRLHSFKG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacattaaactgatagttgggctcgcaaatcctggcgataaatacgctcagacc
aggcacaatgcgggggcttggtacgtacaagagttggcgagagtgtgcggtgccacgctc
gtagcagatagcaaatattatgggttaacagcaagagtgacattgcacgggaaagatgtt
cgtttactcatcccgtcaacttttatgaacctaagtgggaaatcggtcggtgctttagcc
aacttttttcgcatagagcctgaagagatcctggttgctcatgatgagcttgatatgcaa
cccggcgtagctaagtttaaacttggtggcggtcacggcgggcataatggcctgaaagat
attattgctaagcttgccaacaataaaggtttctatcgactcaggatcggtattggtcac
cctggtgataaaaatcaagtgagcaattatgtattaggcaaagcgccggcatcagaacaa
accttgatagaaacggtgattgatgaagccgtgaggtcgactgagttgctatttaatgaa
gatatggcgaaagcaatgcatagattgcactctttcaaaggctag
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