Shewanella sediminis: Ssed_3488
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Entry
Ssed_3488 CDS
T00596
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Ssed_3488
Enzymes [BR:
sse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Ssed_3488
Peptidoglycan biosynthesis and degradation proteins [BR:
sse01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Ssed_3488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
SpoIVA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ABV38092
UniProt:
A8FZ19
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All DBs
Position
4246679..4247476
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AA seq
265 aa
AA seq
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MILNKNTRWVISLFFALTLSACSSSNGGRYDMANDKAPSSAPDVTRVEDAHPKYEPYSRG
GNKKNYTVLGKGYQVMDSGKGYQATGIASWYGSKFHGHLTSNGETYDMYSMSAAHKTLPL
PSYVKVTNLDNSKQVIVRVNDRGPFHEGRIIDLSYAAAHRLDVLKTGTAKVEIEVIYIEN
PESIALAELKETKSHYIQILASSNKKKIDALAKNLETKYLIKTRLVSANNLYRLQLGPIG
QRQIATKLNDKLKNDGYPQSYLISE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaataaaaacaccagatgggtaatatccctatttttcgcactcacactctct
gcatgttcgagctctaacggtgggcgttatgatatggcgaatgataaggcaccgagcagc
gcaccggatgtaaccagagtcgaagatgcccatcctaaatacgaaccctatagccgtgga
gggaataagaagaactacacagtgcttggaaaagggtaccaggtgatggactcgggcaaa
gggtatcaagcaacgggcattgcctcatggtacggctccaaatttcatggacatttgacc
tctaatggcgaaacgtacgacatgtactctatgtctgcagcccacaaaacacttccttta
cccagctatgtcaaagtgacgaatctggataacagtaaacaagttatcgtgagagtgaac
gacaggggcccctttcatgaggggcggatcatagatctctcatacgcggcagcgcacagg
ctggacgtactaaaaacggggacggcaaaggtagagatagaggtcatttatatcgaaaac
ccagaatctatcgcacttgccgaactgaaagagacgaagtcacactacattcagatatta
gcctcttcgaataaaaagaagatcgatgcacttgctaaaaaccttgaaacgaaatacctg
atcaaaaccagactcgtgtcggccaataatctgtaccgacttcagttggggccaatagga
caacgccaaatcgcgaccaaactgaatgataaactaaagaacgatgggtatccccaaagc
tacctgatctctgagtag
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