Shewanella sediminis: Ssed_3559
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Entry
Ssed_3559 CDS
T00596
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3559
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_3559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABV38163
UniProt:
A8FZ90
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All DBs
Position
complement(4338313..4340310)
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AA seq
665 aa
AA seq
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MGTQARQSNKLSKLAMLIGSALALSASSSVTFAADSSQTDSGVTNTVDEVITVIGRSENT
PLNIAANVNIIDAAAIEMSGATTLTEVLRGQSGIQISDSNSGAVFAMRGFSAGQAANNTL
LLVDGRRLNNIDIAAPSINAIPLNQIERVEILSGSAGVLYGDQAVGGVINIITKAPNSAG
GGIQVSGGSFDTYEGKGDISGAISNTWRYYAAASYNQGDNYREHNANKTSSVLGRLQYQT
ESDNFFVETSYYDNDREMAGSLTKEQIKDNPRQVNPFNKDDYQHEMTTAIRTGYQHQLTD
AWSLGADINYTDTQVTGISWGSPSKNKRSFLEFTPKAVANITTEKGDLNIVTGIDLSRGE
SEFDWGRSNVQKVASAYAQASVPLTQSLSYVVGGRYSEVTDDLVDGDVYPQGIELDQDAH
AFELGLNYRPGTSHRFYLRADDNFRFAKVDEQAYTSPGVMGLKPQTGRSYEAGWDWSPAS
HTLRLSLYRLDLEDEIVFDPSAETPDGGKFPGANVNADASRRYGSSLDWDWQITKMVQLG
LEYNYIDAEFTEGVNEGNQLSWVAEHSGRGYFSIDANQNWQVFTELLYTGERFIEGDNGN
ADPKLESYWLTNLAINYTRDAWLASFRVDNLFDEQYVSAGYYSSWGNGYYAGTGRALRLT
ASYRF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggtactcaagctagacaatcaaacaaattatcaaaattagccatgctaatcggcagt
gctctggctctgtctgcgtcgtcgtccgtgacgtttgcggccgattcatctcaaacagat
tctggtgtgactaacacagtcgatgaggttattaccgttatcggtcgcagtgaaaatacg
ccactgaatattgccgccaatgtgaacattatcgatgcggcggccatcgagatgagcggt
gcgacgacactgaccgaagtactgcgtggccagagtggcatacagatctcggactcgaat
tccggcgccgttttcgctatgcgtggtttcagtgctggtcaggccgcaaacaacaccctc
ttgcttgtcgatggacgtcgtttgaataatatcgatatcgcggcgccaagcatcaatgcc
atcccactcaatcagatagagcgcgtcgagatactgtcgggcagtgccggtgtactctac
ggcgatcaggcggtgggcggtgtgattaatatcatcaccaaggcgccaaacagcgcgggc
ggcggcattcaagtgtctggaggcagcttcgatacctatgaaggtaaaggtgatatctcg
ggtgccatcagtaatacctggcgttactacgctgcggccagctataaccaaggtgataac
tatcgtgagcacaatgccaacaagacctcgtctgtattaggtcgacttcaatatcaaacc
gagtcggataacttcttcgttgagaccagctactacgataacgatcgtgagatggcgggg
tcattgaccaaagagcagattaaagataatccacgtcaggttaatccatttaataaagat
gactatcagcatgagatgacaacggctattcgcacgggttatcagcatcaactcaccgat
gcctggtcgttaggtgcggatatcaactataccgatactcaggtgaccgggatcagttgg
ggttcgccaagtaagaataaacgctctttcctcgagttcactccgaaagcggtagcgaat
attacgacagaaaaaggcgacttgaatatcgttaccggtatcgacctgagccggggggaa
tctgagtttgattggggacgaagtaatgtgcagaaggtggctagcgcctatgctcaagcc
agtgtgccgttaactcaaagcctgagttatgtagtgggtggtcgttactccgaggtgact
gacgatcttgtcgatggtgacgtttaccctcagggcatagagcttgatcaggatgcgcat
gcgttcgagttgggcttgaactatcgtccgggcacttcacacagattctatcttcgcgcc
gatgacaacttccgtttcgctaaggtcgatgagcaggcttatacctcaccgggtgtgatg
ggtcttaagccgcagacgggtcgttcatatgaggcgggttgggattggtctcctgcgagc
cacacattgcgcttaagcctgtatcgtttggacttagaggatgagattgtatttgacccg
agtgctgagacccctgatggtggcaaatttcctggtgccaacgtgaacgccgatgcatcg
cgccgttatggctcgagtctggattgggactggcagatcactaagatggtgcaactgggt
ctggagtacaactatatcgacgccgagtttaccgaaggagtaaatgaaggcaatcagctc
tcctgggtcgccgagcactccggccgtggttacttcagtatagatgctaaccagaactgg
caggtgtttaccgagctgttatacaccggagagcgtttcatcgaaggcgataacggtaat
gctgaccctaagctggagtcatactggttaactaatttagcgattaactacacccgtgat
gcctggcttgccagcttccgcgtcgataacctgttcgatgagcaatatgtcagtgccggt
tactacagtagttgggggaatggctattatgcgggtaccggacgtgccctacgtctgacg
gcaagctatcgcttttaa
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