Shewanella sediminis: Ssed_3586
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Entry
Ssed_3586 CDS
T00596
Name
(GenBank) ABC transporter ATP-binding protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_3586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3586
Transporters [BR:
sse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
Ssed_3586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_29
AAA_21
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_15
AAA_27
SMC_N
AAA_30
AAA_22
Bac_DnaA
IIGP
Motif
Other DBs
NCBI-ProteinID:
ABV38190
UniProt:
A8FZB7
LinkDB
All DBs
Position
complement(4371012..4372601)
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AA seq
529 aa
AA seq
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MSTLPSDKPFALELRGIDKRFGAVHANRNIDLQVPPGTIHGIIGENGAGKSTLMNIIYGF
YTADAGDILIGGEVQKLANSKEAISHGIGMVHQHFMLVDNFTVLENVILGAENGPLLKHS
LHDARTELERLAKDYQLEVPLDALIEDLPVGLQQRVEILKALYRGAKILILDEPTGVLTP
QETDHLFHIFDALREQGVTILLITHKLREILAATDNVSIMRQGAMVAHRKTAETNKEELA
ELMVGRKVRLKVDKNAAKPAQVVLSTQDLTYTDEMGVDRLKKVNMDIKAGEVVGVAGVSG
NGQSQLINALAGLLTPTSGSITIGDTRISAEHPSSPDGVRQLSVGHVPEDRLDMGLIKAF
SAEESAILGHQNHSDYNGLVMNKPKAITQECVRLMEEWDVRPQDPKLRSSLFSGGNQQKL
IIAREVEKNPDVLLIGQPTRGVDIGAIEFIHKRIIELRDQGQGILLVSVELDEIMALSDR
IIVMFDGNIVGEVSAEQANEKILGMMMANILPDELSESDAGQTTNGGQS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctacactccctagcgacaaaccttttgcactcgaactgcgtggcatcgataagcga
ttcggtgcagtgcatgctaatcgaaatattgatctacaagttcctcccggcaccattcat
ggcattatcggtgaaaacggggcgggtaaatcgaccctgatgaacatcatctatgggttt
tataccgcagacgccggagatattctgattggcggtgaggttcagaagcttgccaactcg
aaagaggccatcagtcacggtatcggcatggttcaccagcacttcatgttggttgataac
ttcaccgttcttgaaaatgtgattttaggtgccgaaaatggtcctctgctcaagcacagc
ctccatgatgcccgcacagagttagagcggttagcaaaagattaccagctcgaggtgcca
ctcgatgccttaattgaagacttgccggtaggcctgcagcagagggttgagatattaaaa
gccctgtaccgtggcgccaagatcctcattcttgatgagcctacgggcgtactgactccc
caggaaactgatcacctgtttcatattttcgatgcgctgcgtgagcagggcgtcacaatt
ttactgatcacccacaaactcagagagatcctggccgccacagataacgtttcgatcatg
cgccaaggggcgatggtcgcgcacagaaaaacggcagagacgaataaggaagagctggcc
gagcttatggtgggacgaaaggtacgcctgaaagtcgataaaaatgcggctaaacctgct
caggttgtactgtccacccaagatctgacctacacagatgagatgggtgtcgatcgtctc
aaaaaggtcaacatggatattaaggccggtgaggttgtcggtgttgccggagtatccggt
aatggccagtctcagttgattaacgcccttgcaggcctgctcacaccgaccagcggttca
atcaccatcggcgacacgcgtatctctgccgagcaccccagctcgccggacggcgttcgc
caactcagtgtgggccacgtgccggaagacagactggacatggggctgattaaagccttc
agcgccgaagaatcagccatcttagggcatcagaatcactctgattataatggtctggtg
atgaataagcctaaggcgattacacaagagtgtgtacgtcttatggaggagtgggacgta
aggccgcaagatcctaagctaagaagttcactattttccggtggtaaccagcagaagctg
atcattgcacgagaggttgaaaaaaatccggatgtactgctgatcggtcagccgacccga
ggtgtggacatcggcgccatcgaatttattcataaacgtatcatcgaactgagagatcag
gggcagggtatcttgcttgtatcggtggagctcgatgagatcatggccctgtccgatagg
atcatcgtgatgttcgatggcaatatcgtgggtgaagtgagcgccgagcaggcgaacgag
aaaattcttggaatgatgatggccaacatactacccgatgagcttagcgagtcggatgca
ggacaaacgactaacggaggtcaatcgtga
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