Shewanella sediminis: Ssed_3688
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Entry
Ssed_3688 CDS
T00596
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sse
Shewanella sediminis
Pathway
sse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ssed_3688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_3688
Enzymes [BR:
sse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ssed_3688
DNA repair and recombination proteins [BR:
sse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ssed_3688
Prokaryotic type
Ssed_3688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABV38292
UniProt:
A8FZL9
LinkDB
All DBs
Position
complement(4490466..4491134)
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AA seq
222 aa
AA seq
DB search
MVEHSNWDSFIEAEKLQDYFTQLQAFVSAERAQGKAIFPPQDEVFSAFELTPLDRVRVVI
IGQDPYHGPEQAHGLCFSVKHGIKTPPSLVNMYKELVDDIDGFVTPNHGHLSSWAEQGVL
MLNTVLTVEQGKAHSHAKSGWETFTTHALELLNRQTTPIVFILWGAHAIKKGKVITAPQH
HILSGPHPSPLSAYRGFFGCKHFSKTNDLLELDGSDPITWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacattcgaactgggattcatttattgaggctgaaaagctgcaggattatttc
actcaacttcaggcatttgtatctgccgagcgagcccagggtaaagctatcttccccccc
caagatgaggtgtttagcgccttcgaactgacgccattagacagggtcagagtcgttatt
atcggtcaggatccctaccatggtccggagcaggcccatggtctgtgtttctcggtcaag
catggcattaagactcccccctcattggtaaatatgtataaagagctcgtcgatgatata
gacgggtttgtgacgccaaatcacgggcatctgtccagctgggctgagcaaggtgtgttg
atgttaaatacggtgttgaccgtagagcagggcaaggcccactcacatgccaaatcaggt
tgggaaacatttacgactcatgcactggagttattgaatcgacagacgacaccgatcgtc
tttattctgtggggggctcatgccattaaaaagggtaaggtgatcaccgcgcctcagcac
catatcttatccggaccacacccctcaccactctcggcttatcggggattcttcggctgt
aaacatttctccaaaaccaatgatttgttggagctcgatgggagtgaccccattacctgg
caggtgtga
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