Shewanella sediminis: Ssed_3848
Help
Entry
Ssed_3848 CDS
T00596
Name
(GenBank) ABC transporter for cysteine ATP-binding protein
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_3848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3848
Transporters [BR:
sse02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Ssed_3848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
LPG_synthase_TM
AAA_21
RsgA_GTPase
Zeta_toxin
MMR_HSR1
DUF87
NACHT
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABV38452
UniProt:
A8G029
LinkDB
All DBs
Position
complement(4691458..4693272)
Genome browser
AA seq
604 aa
AA seq
DB search
MKALFPFIKLFKHQWLMMFTGLLLSITTLMAGIGLLSLSGWFLSAAAVAGLTVVTAQTFN
YFTPAGGVRFLSIARTASRYGERLATHEATFRLLTQLRSWTWRKLLPLSAKNLQGLRQGD
LLNRLVADIDTLDHLYLRLLTPMAASLLMLGALYLFVAWFDAQLALILCGILLAVWLLLP
FIFYRLGRKPGIEQLEAKRHFRVQLLEFIQGQAEITLFGASDRFRAEISKAETAMLNSQS
AMANVTALSQACLILCHGVAVIIMLYMAASGVGEHVPPGPMLAMMVFMTMACIEMLMPIA
GAFQHLSACVTAAKRVNELVEQEPDIVFNPDCDTKVSKGELLLKDIFFSYQPDSTNRDVE
SDQQSEHTVLRGIDLSVKAGEKVALLGQTGCGKSSLLSLITREWQPTSGSVSVDGRDITE
FGETSLREGITLISQRIYLLSGTLRSNLTLAQKPTEPLATRAQRREAKAVNDEKLIRVLN
KVGLTTLTQGEKPLDTWIGEGGRQLSGGEQRRIGVARALLRDAPLLLLDEPTEGLDKRTE
REILALLFEFAADKTLLMISHRLTAMAQMDRIHLMEQGTISASGTHESLLATDDYYASLH
HKLG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctgtttccttttataaagttgtttaaacatcagtggttgatgatgtttacc
ggtttactcctcagcattactaccctgatggcagggataggtttactgtcactgtcggga
tggtttctctctgccgccgcggttgcgggtttaacggttgtgacggcgcagacgtttaac
tatttcacccccgccggtggggttcggtttctctctattgcccgtacggcaagtcggtat
ggcgaacgtctggcgacccacgaagcgaccttcagattgctgactcagctcagaagctgg
acctggcgtaagttactgcccttgagtgccaagaacctgcaagggttaaggcagggggat
ctgctcaatagattagtcgcggatatcgataccttagatcatctctatctgaggctactg
actccgatggcggcctctctgttaatgctgggagccttatatctttttgttgcctggttc
gatgctcagttagccctgatactgtgcgggatcttattggcggtatggttgctgcttccc
ttcatcttctatcgtttgggtagaaagcccggcatagagcaactcgaggctaaacggcac
ttcagggtgcagttgctggagtttatacagggacaggctgagatcactctgttcggcgcc
agcgatcgattcagagccgagatatctaaagccgaaacagccatgttaaatagccagtcg
gcgatggccaatgtcaccgccttgagtcaggcttgtttgattttatgccacggcgtggct
gtgatcatcatgctctatatggccgcctccggtgtaggagagcatgtgcctcccggacca
atgctcgccatgatggtatttatgactatggcctgcatcgagatgctgatgcctatcgcg
ggggcgtttcaacacctctctgcttgcgtgacagcggctaagcgggtcaatgagttagtg
gagcaggaacccgacatagtgtttaaccccgattgcgacactaaggtatctaagggggag
ttgctgctcaaagatatcttcttcagttatcagcctgatagtacgaatcgagatgtcgag
tctgatcaacaatctgaacataccgttctcagaggtatagatctgtcggtgaaggcggga
gagaaagtcgcacttttggggcagacgggttgtggtaaatccagcctcttgtcgcttatc
acgagagagtggcaaccgacatcgggcagcgtcagtgtcgatggccgggatattaccgag
tttggggaaacttctctaagggaggggatcacccttatcagccaacggatctatctgctg
agcggtacattaaggagtaacctcaccttagctcagaagccgactgagcctctggcgacg
cgggcccaaaggcgtgaagcgaaggcagtgaatgatgaaaagttgatccgggtgttaaac
aaggttggattgacaacattgactcagggtgaaaaaccactcgatacctggataggtgag
ggcggaaggcagttatcaggtggcgaacagcgacgtatcggtgtcgccagagccctgtta
cgcgatgcgcccctgttactgctcgatgagccaactgaaggcctggataagcgcaccgag
cgggagatcttagccctcttgtttgagtttgcagccgataagaccctattgatgataagc
catcgattaacggccatggcgcagatggatcgaattcatttgatggagcagggaacaatt
agcgcctcgggaacccatgaatccctgttagcgactgatgactattacgcgagcctgcat
cataagctaggttag
DBGET
integrated database retrieval system
