Shewanella sediminis: Ssed_3849
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Entry
Ssed_3849 CDS
T00596
Name
(GenBank) ABC transporter for cysteine ATP-binding protein
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
sse
Shewanella sediminis
Pathway
sse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ssed_3849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_3849
Transporters [BR:
sse02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Ssed_3849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_16
nSTAND1
RsgA_GTPase
AAA_29
MMR_HSR1
Dynamin_N
AAA
FtsK_SpoIIIE
AAA_23
AAA_7
MobB
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ABV38453
UniProt:
A8G030
LinkDB
All DBs
Position
complement(4693269..4695098)
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AA seq
609 aa
AA seq
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MDKPLEKVLTSWLKQQKQACGFYLNLTVLFGLLTGLSLVAQAYLIATILHGLIILELPKE
QFATQFYCLVGLIFIRAGLAYGRERVSFEAGRRLRVQIRGAVLDKLTELGPCFIKGKPAG
SWASIVLEQVEDLHDFYARYLPQIILAAFIPLTILVVVFPINWAAGLILLLTAPLIPMFM
ALVGMGAADANRKNFSALAKLSGHFMDRMKGLNTIKLFNRGDAESEAIESASEEFRERTM
SVLRLAFLSSAVLEFFAAVSIAVLAVYFGFSYLDHLNFGHYGAGLTLFTGLFVLILAPEF
YQPLRDMGTHYHAKAQAIGAAEELMALLNHKVESGTESASDPLLVKGKADPLITESFRAG
ISIQASALCVDSPDGTQLLGPVDFNISAGEHMAVVGPSGAGKTSLLNALLGFLPYRGSLK
VNGVELNALNKSQWRRHLAWLGQDPQLFHGTIRDNVSMSKPDMGDETVMALLEKAKVLNF
VERQTHGLNHPIGEQASGVSVGQAQRIALARALGQDASLFVLDEPTASLDNHSEQAVQTA
LREAMSGKACLMVTHRLDQLHTMDTILVLDRGLVVQRGSFDELDQNQGLFKQMQEESNDE
FTNLKGLNR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacccttagaaaaagtactcacctcctggttgaaacaacagaaacaagcctgt
ggtttctatctgaatttgaccgtattatttggtctgttgaccggtttatcattagtggcg
caggcctacctgattgccactattttacatgggctgatcattctggagctgcccaaggag
cagtttgctacccaattctattgtctggtgggactcatctttatccgggcggggttggcc
tatggacgagagagagtcagtttcgaggcgggaaggcggcttagggtgcagatccgtggc
gcggttttagataaattgaccgagcttggcccctgcttcattaaaggcaaaccagcgggg
agttgggcaagtatcgtgttagagcaggtggaagatctgcatgatttctatgcccgttat
ctgccgcagatcatcttggcggcctttataccgctcaccatactcgtggtcgtgtttccg
attaattgggccgccggactgatcctcttgctgacggcgccgctgatccccatgtttatg
gcactggtcggcatgggcgccgccgatgccaaccgaaagaatttcagcgccctggctaag
ctcagtggccacttcatggacagaatgaagggattaaataccatcaagttgtttaatcgc
ggcgacgcagagagtgaggctatcgaatcggcatccgaggagttccgagagcggaccatg
tcggtactcaggctggcattcttaagctctgccgtgctggagttttttgcggcagtatcc
attgccgtactcgccgtttactttggtttcagctatctggaccatctgaatttcggccat
tatggcgcgggtctcaccctgtttaccggtctgtttgtgctgatcctcgcccccgaattt
tatcaaccgcttcgagatatggggacccattaccatgcaaaggcgcaggcgataggtgcc
gccgaagagttgatggcgctgttaaatcataaagttgagtccggcactgaatcggcaagc
gatccactgcttgttaaggggaaggctgaccctcttattactgagagcttcagggctgga
atatcgattcaggcaagtgccctgtgcgtcgacagtcccgacggtactcagttactgggg
ccggtggatttcaatataagcgcgggtgagcatatggctgtcgtggggccaagcggcgcc
ggtaaaaccagtctgctcaatgcattgctgggattccttccctatcgcggaagccttaag
gttaatggagtcgagcttaatgcactcaataaatcccaatggcgtcgccacttagcctgg
ttggggcaagatcctcagctgtttcatggcaccattcgtgacaatgtctccatgagcaag
cccgatatgggtgatgagaccgtgatggccttgcttgagaaggcgaaggtcttgaacttc
gttgaacgtcaaacccatgggctgaatcacccgataggcgaacaggcatcgggcgtctcg
gtgggacaggcgcagcgtatcgctcttgcccgggccctgggccaggatgcttccctgttt
gttctcgatgaaccgacggcgagtctggataatcacagtgagcaagcggtacagacggcg
cttagagaggcgatgtcggggaaagcttgcctgatggtgactcacaggctggatcagctg
cacacgatggataccatcttagtgctggataggggacttgtggtacagcgagggagtttc
gatgagttagaccagaatcagggtctgtttaagcagatgcaggaagagagcaatgatgag
tttactaacctgaaggggcttaaccgatga
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