Shewanella sediminis: Ssed_3861
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Entry
Ssed_3861 CDS
T00596
Name
(GenBank) ABC transporter-related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sse03012
]
Ssed_3861
Translation factors [BR:
sse03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Ssed_3861
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
AAA_29
AAA_16
RsgA_GTPase
KAP_NTPase
MeaB
ATP-synt_ab
ABC_tran_CTD
AAA_18
DUF87
DUF7623
Motif
Other DBs
NCBI-ProteinID:
ABV38465
UniProt:
A8G042
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All DBs
Position
4710966..4712876
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AA seq
636 aa
AA seq
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MISINQAQLIRGSKTLLDETSLTIYPGHKVGLVGANGTGKSSLLALILGKISLDKGDISL
PSGWQIATVAQETPALEVSALEYVIDGDVEYRELERQLHQAQADDNGNAIAHLHGKIDAI
GGYAIRSRAASLLAGLGFSEAEQSNPVRSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDTMYWLEGWIKAYQGTLILISHDRDFIDGIVTEIIHVENHKLNYYKGNYTAFERIRAE
RMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMAELLPSQADSQFHM
AFLEPETLPNPLVTMENVSVGYGDTEILKSVQLNLVPGARIGLLGRNGAGKSTLIKLLSE
ELSPMKGKYETNPGLNIGYFAQHQLESLRLDDTPLQHLSRLAPTTREQELRNFLGCYGFN
GDMVLSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQSFEGAM
IIVSHDRHLLRLSCSDYYLVDGGQVRSFDGDLDDYHQWLLDAAKSANREEVSAEAKPAQD
KKLQKRLEAELRQKLSPMRKVQLKLEKAQQKSSTRLSELEEMLADMSLYEADNKAKLTQV
LSERTQLTQALEESEMEWLEVQESIEEIEQEVRSAL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatatccatcaatcaagcacagttgatccgcggcagtaaaacgcttctggatgaaacc
tctctcactatttacccgggccacaaagtgggcttagtcggtgctaacggcacaggaaaa
tcatcactactcgcgttaatacttggcaaaataagcttagataaaggtgatattagtctg
ccaagtggctggcagatagcgacagtcgctcaggagacgcccgcccttgaggtatcggca
ctagaatatgttatcgatggtgatgttgagtatcgagagcttgaaaggcaacttcaccaa
gctcaggccgatgataacggtaatgccattgcccacctgcacggaaaaattgatgccatt
ggcggctatgctattcgctcacgagcggccagcctgttagccggcctgggattcagtgaa
gcggagcaatccaatccggtcaggagtttttcaggtggttggcgtatgcgcctcaatctg
gctcaagcgctgctgtgccgctcagatctcctgctcctcgatgagccaaccaaccacctt
gacttagataccatgtattggctcgaaggatggatcaaagcctatcagggtacgctcatc
ttgatcagccacgacagagactttatcgatggcatcgtcactgagatcattcatgtcgaa
aaccataagctcaactattacaaaggcaactataccgccttcgagcggatccgtgccgaa
cgtatggcgcaacagcaggtcgctttcgagcgccagcagaaagaacgggctcatatgcag
tcctttgtcgaccgattccgctacaaggccagtaaagcaaaacaagcacagagtcgcctc
aaagcattggagcgtatggcagaactgttaccgtcacaggctgacagtcaatttcatatg
gcatttcttgagcctgaaactctgccgaatccactcgtcaccatggaaaatgtctctgta
ggttatggcgacaccgagatcttaaaaagcgttcaattgaacctggttcccggtgcgcgt
atcggcctgctcggacgtaacggcgcgggtaaatcgacgcttattaaattactctccgaa
gaactctccccgatgaagggaaagtacgagacgaatccgggcctcaatatcggctatttc
gcacagcaccaactcgagagccttcgcctcgatgacactccacttcagcacctgtcacgc
ctggccccgacgacgcgagagcaagagttgagaaacttcctcggttgttatggcttcaat
ggtgacatggtgttatcccccgtccgtcctttttccggcggagagaaggccagattagtt
ttggcattattggtatggcaacgccctaaccttctacttctcgatgagccaaccaaccac
ttggatcttgagatgcgccatgcactgacgatggcgttgcagtcgttcgagggggcgatg
attatcgtatcccacgacagacacctgctcagactcagttgtagcgattactatctggtc
gacggcggtcaagtgcgtagtttcgatggtgacctcgatgattaccatcaatggcttctc
gatgcagccaagtcggcaaacagagaggaggtcagtgcagaggctaaacctgctcaggat
aagaaactacagaagcgtttagaggccgagttgcgccaaaaactatcgccgatgcgaaag
gttcagctcaagctcgagaaagcgcagcaaaaatcgagtacccgtttatctgaacttgaa
gagatgctggccgacatgagtttgtatgaggccgacaataaggctaaattaactcaggtc
ttaagtgaacgaactcagctcactcaagcgttagaggagagtgagatggaatggttagag
gttcaggagtctatcgaagagattgaacaagaggttcgttcagcactctga
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