Shewanella sediminis: Ssed_3885
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Entry
Ssed_3885 CDS
T00596
Name
(GenBank) conserved hypothetical protein
Organism
sse
Shewanella sediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3584
Motif
Other DBs
NCBI-ProteinID:
ABV38489
UniProt:
A8G066
LinkDB
All DBs
Position
complement(4742912..4746586)
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AA seq
1224 aa
AA seq
DB search
MPSLNRIVLIDTHLPGVVELALDGHTNICGTNASGKTTLQRLVPVFYGEYPSRVVPSTRD
SFERWYLPHDSSFIIYEYKRDDGQLNQAVLASAGDGKGVNYRFIAKGFELEDYVKSKNGD
TVLCHTMAELGREMKRAGVAVTNLLNTREFRAIIQNDRALLSTGSNRTELRTYARQFSLC
ESEHSLRHIEKLAKAVHSKEGKMETIKSMVAAILEEDGVNPPSSRLNPQRVEAWIRDSQL
IQGFEQIRPEFEKLEQEFNQLLSAELRLASLKRGYSKDETTEVERQEHNQDLSKSLNGEL
RQLDDEWKELRDELSLDLSAAKGDVAKCEYELDAIEDQHGAFLDADIEQAKLDLEQLPNW
RGSLENLTERHKLQTEKHQDIEAAYNARRSKIGEGLNRELENLHQAQDKQREARDKQREQ
GRSELEALGGQWREQMDSGREKFQQEEYQLKLSTAELKVRVDSVTYTEEEKLALAVFDER
ITRADEDQEVCNAKVDRLTIEERKLRAKRDQANESLRLAGIRVTERQSELDELHHILFPQ
SHTLLEFLRKEADGWENTIGKVINPELLHRSDLHPAMLSDNLEAIYGINLDLKAIESPEY
ASSEQELRIRHAKAEEALLGAKELQAEAEDSLVAINAELDGLTRELTFARTAYKNSRDDL
RRLFDEKRAEQDKINKALKERKSEAQKKLSRLDSDIKQLKHQHQEWLEEQKEQALEARME
KNAYWQEVVGALDSQLEQTKENIQHRRDHAKSELKACEQWYKNELKSRGVDEDKILALKQ
EIRGLESSISKAEQRRNEVLRYEDWYQHTWLMRKPKLQTELSTVKHATSELEQQLKSKAN
EVKAKRQELDSQRKQSDAIQVEASENLTKLRSVMRKLSELKLPASNDDAQGGLTERLRQG
EEQLLKRDSLLGSVKQYVEHFDSVIASKSGSSLSETWERAREESSFVNDKGIRLLDYRKL
VPQLEQLLNVMVPQSIMALREQGRIFGVDLTAFYDVLADIDRRIASQSARITREVGEELF
LDGVSESAVKIRSRISELEFWPELEEFVKAFRQWKADGFSELPDENYTNSMRRALDIIGR
AALSGGISKLLEIELRLKEGNSDLVIRTDRQLNESSSHGMAYLILCKFLLAFTRLLRGRS
NVTIHWPIDELGTLHHGNVKKIFDACENNNISVLGAFPNPESEVLNLFANRYIINKQTRK
LQVVKPQANPIADKLNKRFAREAV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcttgaatcgaattgtgcttatcgatacgcacctacccggcgtagtggaactc
gccctcgacggccacacgaatatctgtggtaccaatgcctcaggaaagaccacgcttcag
cgtctggtcccggttttttatggtgagtatccaagtcgagtcgtgccctctacccgtgat
agcttcgagcgttggtacctgccccatgattcaagttttatcatctatgaatataaacgc
gatgatggccagttaaatcaagcggttctggcctctgccggtgatggtaaaggggttaat
tatcgtttcatcgctaagggcttcgagcttgaagattatgtgaagtcaaaaaatggcgac
acagtgctttgccataccatggcggagctgggcagggagatgaagcgtgcaggcgtcgcg
gtgactaatctgctcaatacccgggaatttcgcgccatcattcaaaatgatcgtgccctg
ttgagtaccggaagtaatcgcaccgagcttcgtacctatgcgaggcagttttcattatgt
gaatccgagcattcactgcgtcatatcgaaaagttagccaaggcggtgcactcgaaagag
ggcaagatggagacaataaaatcgatggtcgccgccattttggaagaggatggtgttaat
ccgccgagctcccgcctgaatcctcagcgcgtcgaagcctggatacgagacagccagctt
attcagggattcgagcagatccgcccggaatttgaaaagcttgagcaggagtttaatcaa
ctcttgagcgccgagctgcgccttgcgagtcttaaacgtggctacagtaaagatgaaacc
acagaggtggagcgtcaggagcataaccaggacctttctaaatccctcaatggtgagtta
aggcagttagatgatgagtggaaagagctgcgcgatgagctcagtttagatctatcggcc
gcgaagggtgacgttgctaagtgtgagtatgagttagacgcgatagaggaccaacacggc
gccttcttagatgcagatatcgaacaggccaaactggacttagagcagctacccaattgg
cgtggcagtcttgagaacttaaccgagcgccataagctgcagactgagaagcatcaggat
atcgaagcggcatacaatgcccgtcgcagtaaaattggtgaggggctcaaccgggaactg
gaaaacctgcatcaggctcaagataagcagcgcgaagccagagacaagcagcgtgaacag
ggtcgaagcgagctggaggcgttggggggtcaatggcgcgagcagatggacagtggccgt
gaaaagttccaacaagaggaatatcaacttaagttatcgacagccgaacttaaggtgcgt
gtcgatagcgtgacctataccgaagaggaaaagctggcattggccgtgttcgatgagcgg
atcacacgggccgatgaagatcaggaagtatgcaatgccaaggtcgacaggttaaccatt
gaggagcgtaaacttcgtgccaagcgagaccaggccaatgagagcctgcgtctggccggt
attcgcgtgacagagcgccagagtgagctcgacgagctgcatcatatcctgtttcctcaa
tctcatactctgcttgagtttttacgcaaagaagccgatggctgggagaacaccataggt
aaggtgattaacccagagttgttacatcgcagcgacctgcacccggccatgctcagcgat
aatttagaggccatctacggaatcaacctggatcttaaggctatcgagtcgccggaatat
gcatcttcggagcaagagttacgtattcgtcatgctaaggccgaagaggcgttactcggc
gccaaagagttgcaggccgaggccgaagatagcctggtcgccatcaatgctgaattggat
ggattgacccgggagctgacctttgcccgtacggcatataagaacagtcgtgacgatctt
cgtcgcctgttcgatgagaagcgcgccgagcaagataagatcaataaagcactcaaggaa
cgaaaatcagaagcgcagaagaagctgagtcgtttagacagtgatatcaagcagctgaag
catcaacaccaggaatggcttgaagagcaaaaagagcaggcattagaagccagaatggag
aaaaatgcctactggcaggaggtggttggcgcgttagactctcagttggagcagacaaag
gaaaatattcaacacaggcgcgatcacgctaagagcgagcttaaggcctgtgagcaatgg
tataagaacgagcttaaatcccgcggcgtcgatgaagataagatcctggcgcttaagcaa
gagatccggggactggagtcgagtatcagtaaggctgagcagcgtcgtaacgaggtactc
agatatgaagattggtatcagcatacctggttaatgcgtaagcctaagttgcaaacagag
ctgagcacagttaagcatgcgacctcagagctcgagcagcaactcaaatctaaagccaat
gaagttaaggcgaaaaggcaggagctggacagccagcgtaagcaatctgatgccatacag
gtagaggcatcggagaacttaactaagctgcgtagcgtgatgcgtaagcttagcgaactt
aaattgccggcaagtaatgatgacgctcaaggggggctcaccgaacgtctgcggcagggt
gaagagcagctactgaaaagagacagtttattaggctcggttaagcagtatgtggagcat
ttcgactcggttatcgccagtaagtcaggctcgagtctgtctgagacctgggagcgggct
cgtgaagagtcgagctttgtaaacgataaagggatccgtctgctggattaccgcaagctg
gttcctcaactcgaacagctgctcaatgtgatggtgccgcaatcgattatggcgcttcgc
gaacaggggcgaatttttggtgtcgatctcaccgcattttacgatgtactggccgatatc
gatcgccgcatcgcctcacaaagtgcgcggatcacccgtgaagtgggtgaagagctgttc
ctcgatggcgtttccgagtcggcggttaagatccgctctcggatcagcgagctggagttc
tggcctgagttggaggagtttgttaaggccttccgtcagtggaaagccgatggattcagt
gaacttcccgatgaaaactacaccaatagcatgcgccgagccctggatattatcggccga
gccgcactctccggtggtatctccaagctgctcgagattgagttgaggctaaaagagggc
aatagcgatctggtgatccgcaccgatcgtcagctcaatgagtcttccagtcacggtatg
gcgtatctgatcttatgtaagttcctgctggcatttacccgcctgctacgtggccgctcg
aatgtcacgattcattggcctatcgatgagcttggcaccttgcatcatggcaacgtaaag
aagatcttcgatgcctgtgaaaacaacaatatttccgttttgggcgccttccccaaccct
gagtctgaggtacttaacttgtttgctaaccgatatatcatcaataaacagaccaggaaa
cttcaggtggtgaagcctcaggctaatcccatcgcagataagttgaataaacgattcgca
agggaggcggtgtaa
DBGET
integrated database retrieval system
