Shewanella sediminis: Ssed_3972
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Entry
Ssed_3972 CDS
T00596
Name
(GenBank) protein of unknown function DUF558
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sse03009
]
Ssed_3972
Enzymes [BR:
sse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
Ssed_3972
Ribosome biogenesis [BR:
sse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ssed_3972
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ABV38576
UniProt:
A8G0F3
LinkDB
All DBs
Position
4857896..4858627
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AA seq
243 aa
AA seq
DB search
MRIPRIYQASTFTVGMSVALDDEAASHVGRVLRMSSGEQVSLFNGDGNEYLAQIESASKK
NVQVTILSSVANESESPLHLHLGQVISRGDRMDFTIQKSVELGVNTITPLFSERCGVKLS
GERLEKKIHQWQKIVIGACEQSGRSLVPQVRPAMSLEAWSAEQTDSLKLNLHPRAAHGIG
GLTLPEPRVRLLIGPEGGLSETEILMTEQHAFTDVLLGPRVLRTETAALTAISALQLKFG
DLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcccaagaatataccaagcatccaccttcacggtaggtatgtcagttgcgctc
gatgatgaagcggcctctcatgttggtcgtgtactgcgcatgtccagcggtgaacaggtg
agcctgtttaatggtgacggtaacgaataccttgcgcagatagagtccgccagtaagaaa
aatgttcaagtcaccatcctttcatctgtagctaatgaaagcgagtctccgctacacctg
catttaggtcaggtgatctcacgtggcgatcgtatggactttaccattcagaagtctgta
gagctgggagtgaataccattacgccacttttttctgaacgctgtggcgtaaagctatcg
ggcgaacgattggaaaagaaaattcatcaatggcaaaagatcgttattggggcctgtgag
cagtcgggtcgtagtcttgttcctcaagtaagacccgcgatgtctttagaggcctggagc
gcagaacagacagactctcttaaattaaacttacacccgagagcggcacacggtattggt
ggattaacccttcctgagccaagagtcaggctgttgatcgggcccgaaggtggcctgtct
gaaaccgaaatattgatgacagaacaacatgcctttaccgatgtattattaggcccccgg
gttttgagaaccgaaacggcagccttaacggcaataagtgcactgcaactgaaatttggt
gatctgggttaa
DBGET
integrated database retrieval system
