Shewanella sediminis: Ssed_3978
Help
Entry
Ssed_3978 CDS
T00596
Name
(GenBank) rRNA (guanine-N(2)-)-methyltransferase
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sse03009
]
Ssed_3978
Enzymes [BR:
sse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
Ssed_3978
Ribosome biogenesis [BR:
sse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ssed_3978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
MTS_N
Methyltransf_25
Methyltransf_23
Methyltransf_12
PrmA
Methyltransf_31
Ubie_methyltran
Methyltransf_11
Methyltransf_18
Spermine_synth
UPF0020
MetW
Methyltransf_10
Methyltransf_32
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ABV38582
UniProt:
A8G0F9
LinkDB
All DBs
Position
4865578..4866609
Genome browser
AA seq
343 aa
AA seq
DB search
MLTNPSQLILRNSDLFAGQNVLVLNYEGDLLPKQLLESAKKVTALSLDYHHHLIMSPYAE
QNLALHFGHMLPDEEQFDTVIIYYPKAKALASYLLNLAGVHLKPNGQLLVVGENKGGIRS
IVKQVPDYFDSPFKQDSARHCLLYVSQLVEKAPQINLSDWVRNYQLETPQGEITICNLVG
VFSEKRLDEGTKLLLSHLPKMSGRVLDFGCGAGVITAALLKAQPELKVECVDINAMAIES
CKLTLAANNFTADTYPSDGLTQTKGLFNGIISNPPFHDGLRSTTDIAKNFVKDSVQKLKK
GGVWHIVANRHLPYSDSISTHFKQVNVSAENNRYKVYSNKINS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgttaactaatccatctcaactcattcttagaaatagcgatctatttgcaggtcaaaat
gtattagtgcttaactatgaaggcgatctgctacccaaacaattattggaaagcgctaaa
aaagtcacggcgctatcgctcgattatcatcatcacctgattatgagcccatatgccgag
caaaacctagcacttcactttggtcacatgttgcccgatgaagagcagttcgatacggtg
attatctattaccccaaagcgaaggcacttgcatcctacctgctaaacttggctggcgtt
catctgaagcccaatggccaacttctggttgtcggagaaaataagggggggattcgctct
atcgtcaaacaggtacccgattacttcgatagcccttttaaacaagacagtgccaggcac
tgcttactctatgtgagtcaactcgtagagaaagcccctcagattaacctctcagactgg
gtgcgaaattatcaactcgaaacccctcaaggagagatcacaatttgtaatctcgttgga
gtttttagtgaaaaacgtttagatgaaggaacaaaactgctcctgtctcacttgcctaag
atgtctggccgagtgttagattttggttgtggcgccggcgttataacggcagccttactc
aaagcacaacctgagctaaaagttgaatgcgtcgatatcaatgcaatggcgattgaatct
tgcaagctcaccttagcagccaataactttacagccgacacctacccttcagatggactg
actcaaaccaaggggctttttaatggcatcatatctaaccctccatttcatgatggcttg
agaagtaccaccgacattgccaaaaattttgtaaaagatagtgtgcagaagcttaaaaag
gggggcgtttggcatattgttgctaatagacatcttccatatagtgattcaatttcgacg
cactttaagcaggtaaacgtatctgccgaaaacaacaggtacaaggtttattcgaacaaa
atcaacagctaa
DBGET
integrated database retrieval system
