Shewanella sediminis: Ssed_4137
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Entry
Ssed_4137 CDS
T00596
Name
(GenBank) putative outer membrane adhesin like proteiin
KO
K20276
large repetitive protein
Organism
sse
Shewanella sediminis
Pathway
sse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ssed_4137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
Big_11
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ABV38741
UniProt:
A8G0W8
LinkDB
All DBs
Position
5056631..5061430
Genome browser
AA seq
1599 aa
AA seq
DB search
MGVSIAKQDAVVTNLVGQLKAKDEQGNVRDVTIGDLIKNGEQLIFSPNAQFILEMADGSV
VDETNIVSEEPSLSPTPEEGLATAPVSTDAEIAALQAQILAGEDPTAGLPETAAGTAAGA
GGNEGTDFITLDRTADETIAGSGYDTSGFDLAAAPAIDELIIAEENILPTLTSSSITLSE
ANLPQGSSPLASALSQANTITLAAPNEISLLVINGVEVFTGGVFAGPVAITSASGTLNIT
GFDAATGILSYSYTLNSAADHSTADLQADTFAVSLTDILGNNTTSTITANLLDDAPSGQD
DLENIGEDDVSVSGSVIINDTQGADSSTVSQITNSDGASLAIAQAANISGSFGSLQISAD
GSYSYLLSTQLDAVQSLAQGEQVTDIFTYQLTDSDGDSVPVTLTLTITGTNDTPVITTEI
GDGADQGTVIESGNEDDGTIVPGVPQTTGTLTATDIDNGAVLSWSGSATGTFGSFVIDAV
SGQWSYTLDNLLVDNFAENSLSQEEFLVTVTDEFGATATQLVTITINGTNDSPIITSSAA
DATGSVNEQPAEGVVLDPDTQTATGTLTASDVDTGAVLSWSGDADSLYGSFSIDPMTGKW
TYTLDNQAAEILAEGEVVQENFLVTVIDEFGATDTQTVTINITGKDEASVIANDSNTIDE
DTVALGNVLDNDSDEDDLLTVNSFTVEGSSYSAGTSVDLANGTLVLNEDGSYVFTPDANW
NGDVPIITYTTNTGATATLTIVVEPVNDAPDALNNSYNLNEGGFTSGNIITDNTGVGVDS
DIDGGALNITHINGIAVTFISGTAILPIGDGTLTINQNGSFTYAHNGEEPEPTSFTYTIN
DGLGGTDTASVFFNINPVNDGPFAEDDSFSVDEGALLGGNVITHIDNNDGLLDSDGGDGG
PLSITQVNGADLVFNLGWSQDIVVGNGTLRIKADGTFEYQHDGSDPEEVPPTFQYTLSDG
SGTDTAVVTITTNPVNDGPEIVSIDLAAVSEEGLLYGIKDGPLPPDDTTDEVSFVGTLSF
TDVDSSNFGISIDDTNIGQYYSGSTEIIWSWSGNTLTGTAGSMTVMTVVFGAVSGTAPDF
SVNYTISLFAPVNHDPESNIEDVLPIAFAVTVDDLNGGSADTTLTVNIEDDSPVDELDPQ
AEPSITNSIGQYITGDLFAPGADGFGNVVFDVTAEVKGNLLYNGSFLSYDMDGNTLVASS
PLDDTVVFTITAVPDGDGQYDYKLLLLEEIQLKTDVTFEVNDAPAGFNETYYVDSDGKIY
SHDGQVVEEIATITSSDSLNSNEHGIGVGSTPSIDTGEKIVFHYGDLGTLGAKIVLGTGV
NATRDGNSVFNYTVTYINGETKEFTGVVLDGTYEIEAKFTDDNFYSNVVSIEIEYVNGDD
FQVAESTSTVASVTENPIDIDFTYTATDADGDSVFDPDGEPGGFTVVVEPDTGSDDINIL
AGTDAEDTLLGGIESDYIIGGTGDDTISGDAGADILIGSEGSDTIDAGVDTDRDAIIWEV
GSADESIDTIYNFNPVYDVLNLSDVLVNEAPGDLEDFLSFNFVGGSTEIVLDTNGTSSAG
GDTLTILLDGVDLSTIYGPTPTEIINGLLDDDALIVDVP
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttcaatagctaaacaagatgccgttgtcactaacttggttggtcaattaaaa
gccaaagatgaacagggaaatgtcagagatgtaacgataggcgatcttatcaaaaacggt
gagcaactaatcttctcgccaaatgcacaatttattctggagatggccgacggctcggtc
gtcgatgaaacaaacatcgtatcggaagagccaagcttatctcctactcctgaggagggg
ctagctacggcgcccgtgtctaccgatgcggaaattgcagccctgcaagctcaaatttta
gcgggtgaagatccaacagccggactgcctgagaccgcggctggcaccgcagccggagcc
ggtggtaacgaaggcaccgactttatcaccttagacagaactgctgatgaaacgatagcc
ggtagtggatatgataccagtgggttcgatctggctgcagcacccgctattgacgagcta
atcattgctgaagaaaatattcttcctacattaacttccagctccatcactctttcagaa
gcaaatctcccccagggctcctctccattagcaagtgctttatcacaagcaaacacaatt
acacttgccgcccccaatgaaatatccctcttagtgataaatggcgttgaagtatttacc
ggtggcgtatttgccggacccgtagcgataacgtctgcaagcggaacattgaatataacg
gggtttgatgctgcaaccggcattctgagttatagctacaccttgaactcagcagccgat
catagcactgcagatcttcaagcagataccttcgccgtgtcgcttaccgatattctgggc
aacaataccacctcaactattaccgcaaacctgctcgatgatgcccctagcggacaagat
gacttagagaacataggagaggatgacgtttcagtttcaggaagtgtcatcattaacgac
actcaaggtgccgactcatctaccgtttcacaaatcactaactcagatggagccagctta
gctatagctcaggcagcgaatattagcggcagcttcgggtcattacaaatatctgccgac
ggtagctatagctatctgttatcgactcagctcgatgcggttcaatctctcgctcagggg
gagcaggttacagatatatttacttaccaactcacagacagtgatggtgatagcgtgccg
gtaacgcttacgctcaccataaccggcaccaacgacacccctgtcattactacagaaata
ggtgatggagccgatcaaggcactgtcatcgaatcaggaaatgaggatgacggcaccata
gttcccggagtgccacaaacaacgggcaccctcaccgcgaccgatatagataacggtgcg
gtattgagctggagcggtagcgcaacaggaaccttcggcagctttgtcatcgatgccgta
agtggacaatggtcatacaccttagataacctgcttgtcgataattttgccgaaaatagc
ttatctcaagaggagttcctggttaccgtgaccgatgagtttggtgcaacagccacacaa
ctggtgaccatcaccatcaacggtaccaatgacagcccaattatcacctcatcggctgcc
gatgccacaggtagcgtcaacgaacagcccgctgaaggggttgtgctcgatccagacact
caaacagccaccggaacactcaccgccagtgatgtagataccggggcagtcctgtcctgg
agcggcgatgccgactcactctatggcagctttagcatagatccgatgaccgggaagtgg
acctataccttagataaccaagcagcagagatcttggccgaaggtgaagtggtacaggaa
aactttttagtcactgttatcgatgaatttggcgccaccgacactcagacagtcactatc
aatattaccggtaaggatgaagcctccgtcatcgctaatgacagtaacaccatagatgaa
gacacggtcgctttaggcaacgtgctggataatgacagtgatgaggacgacctgctaacc
gtcaacagctttaccgtagagggcagtagttacagcgcaggaaccagtgtcgatttagca
aatggcaccttagttcttaacgaagatggtagctatgtgttcacccctgatgccaactgg
aacggcgatgtccccattattacctacaccaccaataccggcgcaaccgcaaccttgacc
atagttgtcgagccagtcaatgatgcccccgatgcgctaaacaacagttataatctcaac
gaaggtggtttcacaagcggaaacatcattaccgataacaccggagtcggtgtcgacagt
gacatagatggcggcgcactgaacatcacccacattaacggtattgcagttacattcatt
agcggcacggcgattcttccaatcggcgatggcaccttaaccatcaaccagaacggtagc
ttcacctatgcccacaacggtgaagaacccgaaccaaccagctttacctacacaattaac
gatggattgggaggaacggacactgcaagcgtattcttcaatatcaacccggtcaacgat
ggcccgtttgccgaagatgacagcttcagtgtcgatgaaggggccctgctcggcggcaac
gtcatcactcacatcgataacaacgatggcctgctggatagcgacggcggcgatggtggc
ccactgagtatcactcaggttaatggcgccgatctggtatttaacctcggctggagtcag
gacatcgtagtgggtaacggtaccttgcgcatcaaagccgacggtaccttcgagtatcaa
catgatggcagcgatcccgaagaggtaccgcctaccttccaatacacattaagtgatggt
tcaggcacagatacagcagtcgtgactatcaccaccaaccctgttaacgatgggcctgaa
attgtcagcatcgatttagcagctgtatcggaagagggtttactctatgggatcaaagat
ggtccgctaccgccagacgatactacggatgaagtctcttttgtcggtacactcagtttc
accgatgtcgacagcagcaacttcggtatatctatagatgacaccaatatcggtcaatac
tattctggaagcactgaaataatctggagttggagtggtaatactcttactggtactgca
ggctcaatgacagttatgacagtcgtatttggcgctgtcagtggtacggcaccggacttc
agcgtcaactacaccattagcctgttcgctccggtaaatcatgatcccgaaagcaatatc
gaagatgtactgcctatagcctttgccgtaacggttgacgatcttaacggtggcagcgcc
gacaccactctcacggtcaatatcgaagatgactcgccagtcgatgagcttgacccacaa
gctgaaccatcaataaccaatagcatcggccaatacatcactggagatctatttgcccct
ggcgccgatggttttggcaacgtggtcttcgacgtcactgccgaggtcaagggtaacctt
ctatataatggctcatttctttcctatgacatggacggaaatacgttagtagcatcgtca
ccacttgacgacaccgtcgtatttaccataactgcggtacccgatggagacggtcaatat
gactacaaactactcttactggaagagatccagctaaaaaccgatgttacatttgaagtc
aatgatgcacccgctggtttcaatgagacctattacgtcgacagcgatggtaaaatatac
tctcatgatggccaagtagttgaagagatcgctacaattaccagctccgatagtcttaat
tccaatgagcatggtatcggcgttggctcaactccctctattgatacaggcgaaaaaatt
gtattccattacggtgacttaggcacgttaggcgcaaaaatagtcctcggaaccggggtc
aatgcaacccgagatggtaacagtgtatttaactacaccgtgacctacataaatggagaa
acgaaagagttcacgggcgtcgttcttgatggaacatacgaaatagaagctaagttcacc
gatgacaatttctactcaaatgtagtatctatcgagatcgaatatgttaacggagatgac
ttccaagttgccgaatcaacctcaacagtagccagcgttacggagaatccaatagatatt
gattttacctacacagcaaccgatgctgatggagatagcgtctttgaccccgacggagag
ccaggtggtttcaccgtcgttgtagaaccagatacaggcagtgacgatatcaatatcttg
gccggaaccgatgccgaagacactcttttaggtggaatagagagtgactacatcatcggc
ggcaccggagatgacacgatatctggtgatgcaggagccgatattctaatcggcagtgag
ggctctgacaccatagacgccggtgtagatacagaccgtgacgccattatctgggaggtg
ggctctgcagacgagagcatagataccatctataacttcaacccggtctacgacgtgctc
aacctatccgatgtgttagtcaatgaagcacctggcgatctggaagacttcctctcattt
aactttgtaggcggcagcacagagatagtcttggatacaaatggaacatcatcagctgga
ggagatacactaaccatactattagatggggtagacctatctaccatctatggtccaact
ccaacggagatcatcaacggactcctcgatgacgatgcactgattgttgatgtaccataa
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integrated database retrieval system
