KEGG   Shewanella sediminis: Ssed_4147
Entry
Ssed_4147         CDS       T00596                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sse03400]
    Ssed_4147
Enzymes [BR:sse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ssed_4147
DNA repair and recombination proteins [BR:sse03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Ssed_4147
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ABV38751
UniProt: A8G0X8
LinkDB
Position
complement(5096880..5098892)
AA seq 670 aa
MKLNPGQNDAVHYVTGPCLVLAGAGSGKTRVIINKIAYLVQKCGYQARTIAAVTFTNKAA
REMKERVAQSMGRKEARGLWISTFHTLGLEIIKREHKVVGLKPGFSLFDDQDSLALLKEL
TEDEFDGDKDLLKMLMTAISNWKGDLVVPDQALKIAKDEQSQLFAGLYQRYAKHMKAYNA
LDFDDLILLPTLLLRHNQEVRERWQKRIQYMLVDEYQDTNTSQYELVKLLVGTRARFTVV
GDDDQSIYSWRGAKPQNLVLLGTDFPKLKLIKLEQNYRSSQCILRAANILIANNPHVYDK
ALFSELAYGEPLRVLIAANEEQEAERVIAEMVRHKFVGRTQYGDYAILYRGNHQSRLLER
ALMTNRIPYKLSGGTSFFGRAEIKDIMAYLRLVVNPDDDNAFLRVVNLPKRGIGPSTLER
LGNYANERHISMFEAIFEAELNHHLPPAAMASLYKFGQFVIDTGEKATRGDPVDAVKHLI
RNINYEDYLYETSTSAKAAEMRMKNISELYRWVTEMLEGDELDEGMTLPEVVTRLTLRDM
MERNSEDESGDQVQLMTLHASKGLEFPYVFMVGTEERILPHQSSIDEDNVEEERRLAYVG
ITRAQKELWFVLCRERRQFGETMRCEPSRFLMELPQDDLVWENRKQPQSEQQRQQVGKSN
IANLRDMFKK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaagctaaaccccggacaaaatgatgcggtgcactatgttaccggcccttgcttagtg
ctggctggtgctggcagtggtaaaaccagggtgatcattaataagatcgcctatttagtg
caaaagtgtggttatcaggcccggacgatagcggcggtgacttttaccaataaagcggca
cgagagatgaaagagcgtgtcgctcagtctatggggcgtaaagaggcccgaggtttatgg
atatccacattccatacacttggtttggagatcatcaaacgtgaacataaggttgttggc
ttaaaacctgggttttctctattcgatgatcaagactctcttgcgctgctaaaagagctc
accgaagatgagttcgatggtgataaagacctgctcaagatgctgatgacggcgatctct
aactggaaaggggatctggttgttcccgatcaggcactgaagattgccaaagatgagcaa
tcacagctttttgccggcctataccaacgttatgctaaacatatgaaggcgtataacgcg
ctggattttgatgatcttattctgctacccaccttattgttaagacacaatcaagaggtg
agggaacgctggcagaagcgtattcaatacatgcttgtggatgagtatcaagataccaat
accagtcagtatgaactcgttaagttgttagttggaacgcgtgccagatttaccgtggta
ggagatgatgatcaatctatctactcctggcgtggcgctaagccgcaaaacctggtcttg
ttgggtacagacttccccaagcttaagttgataaaactcgagcaaaactatcgctcgagc
cagtgtattttaagagccgccaacatacttatcgctaacaacccccatgtctacgataag
gcgctgtttagtgagcttgcctacggtgagccattgagagtattgatcgcagcgaatgag
gagcaggaggcggagcgtgttatcgcagagatggtccgtcataaatttgttggcaggact
caatacggcgattacgccattctctaccgtggaaaccatcaatcgcgtttgcttgagcga
gcattgatgaccaaccggatcccctacaaactcagtggcgggacctcattcttcggcagg
gctgaaattaaagatatcatggcctatctcaggttggtggtgaatccggatgatgataat
gcgtttctacgtgtggttaatctgcctaagcgggggattggcccatcgacacttgagcgt
ttagggaactatgctaacgagcgtcatatctctatgtttgaagctatcttcgaagccgag
ttaaaccatcatctacctccggccgcgatggcgtccttgtataagtttggtcagttcgtt
atcgacacaggtgaaaaagcgacgcgcggtgatccggtggatgcggttaagcacctaatt
cgtaatatcaattacgaagattacctctatgagaccagcacaagtgccaaagctgctgag
atgcgaatgaagaacatctccgagttataccgctgggtcactgagatgcttgagggtgat
gagttggatgaagggatgactttgcctgaagtcgtcacgcgtttaacgctcagggatatg
atggagcgtaatagtgaagatgagagcggtgatcaggttcagctgatgacgctgcatgcc
tctaaagggctggagttcccctacgtgtttatggtcggcaccgaagagcggatcctgcct
caccagagcagtatcgatgaagacaatgtggaagaggagcgtcgcctcgcctacgtgggg
atcacccgagctcagaaagaactctggtttgttctgtgccgtgagcgtcgccagtttggt
gaaactatgcgctgtgaaccgagccgtttcttgatggagctgccgcaagatgaccttgtt
tgggaaaaccgtaagcaacctcagagcgaacaacagcgtcagcaagttggtaaatctaat
attgccaacttaagagatatgtttaaaaagtag

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