Shewanella sediminis: Ssed_4284
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Entry
Ssed_4284 CDS
T00596
Name
(GenBank) cytochrome c-type biogenesis protein CcmF
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_4284
Transporters [BR:
sse02000
]
Other transporters
Others
Ssed_4284
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
DUF2651
Motif
Other DBs
NCBI-ProteinID:
ABV38888
UniProt:
A8G1B5
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Position
complement(5262860..5264839)
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AA seq
659 aa
AA seq
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MIPELGHLSLIIGLAFAFLLASVPLIGVARKDQYLVRYAWPLSYGMFFFIFLSVVVLGYS
FAIDDFSIAYVAHHSNSQLPIFFKIAAVWGGHEGSLLFWVFSLSAWSAAVAYFSKSIEEV
FVARVLAVLALIIIGFTLFMILTSSPFERLFPVPMEGRDLNPMLQDVGLIFHPPMLYLGY
VGFAVSFAFAIAALMGGSLDSAWARWSRPWTLAAWVFLTGGISLGSWWAYYELGWGGWWF
WDPVENASFMPWLIGTALLHSVIVTEKRAAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTS
VHSFAADPSRGMFILLLLGLAVGGSLTLFAFRASEMKSPARFELKSKETMLLVCNILLTV
ACGTVLLGTLYPLLIDALNMGKISVGPPYFNAVFVPIVLVLFVFMGIGPNIRWKKTKPGE
LKAKLLVPAVIATVVGAAAPFLADGQFNIWVMLGVGTATWVTLTTLRAAFDITKAKDGSF
SLARMGRSQLGMIIAHLGIAVSVVGGTMVSNYSIEKSVRMGPGISQELAGYTFNYIETKN
VVGPNYTAQQGQVEVTKDGEFVALLRPDRRQYNVRTMDMTEAGIDWGLFRDLYITMGDPL
SRTQFAVRLNYKPFVRWLWFGSIFMMVGGFFAASDKRYRTKKVTEASKADAQKEKLATA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagaattaggacacttatcgttgataataggattggcattcgctttcctgtta
gccagcgttcctttaattggtgttgcacgtaaagaccaatacttagtgcgttatgcttgg
ccattaagttatggcatgttcttctttatattcttatccgtcgttgttcttggttatagc
ttcgctattgatgatttttcgatagcatacgttgctcatcattcaaattcacaactgcca
attttctttaagatagctgcggtatggggtgggcatgaaggctcattactattctgggtt
ttctccctttcagcatggtctgcagcagtagcctatttcagtaaatctattgaagaggtc
ttcgttgctagggtactggcagtactggcattgattataataggctttacgctgtttatg
atcttaacgtcgagtccatttgagcgtttgttccctgtgccaatggaagggcgcgacctc
aaccctatgcttcaggatgtaggattaattttccatccgcctatgttgtacctcggttat
gttggcttcgccgttagctttgcttttgcaattgcggccttaatgggcgggagtctcgat
tctgcctgggcacgctggagccgtccgtggacactcgcggcttgggtattccttaccggt
ggtatttcattaggttcttggtgggcatattatgagcttggctggggcggttggtggttc
tgggatccagttgaaaacgcgtcatttatgccttggttgatcggtaccgcgttattgcac
tccgttattgttactgagaagcgcgccgcattccgtaactggacggtattgctatctatc
tttgctttctcattgagcttgcttggtaccttcatcgttcgttcaggtgttctgacttca
gtgcattcatttgcagcagacccaagtcgaggcatgttcattctcttgctcctggggctg
gcagtcggcggttcgctcaccttatttgcatttagggccagtgagatgaagagtcctgcc
cgtttcgagctgaagtcaaaagaaaccatgctgttagtgtgtaatattttgctgacggta
gcgtgcggtacggtacttctgggtaccttgtatccgctactcatcgatgcactaaacatg
ggtaaaatttccgtaggacctccttactttaacgcagtgtttgtgcctatcgttcttgta
ctatttgtctttatgggaatcggtccaaatattcgttggaaaaaaactaagcctggcgaa
ttaaaggctaagttattggtacctgcagtgatcgcaacggttgttggtgcggcagctcct
ttcctagccgatggtcaattcaatatctgggttatgctgggtgtgggtaccgctacatgg
gttacccttaccacgttaagagcagccttcgatatcaccaaagctaaagatggctcgttt
agcttggccaggatgggaagaagtcagctgggtatgatcattgcccatctgggtatcgct
gtttctgtcgtaggtggaacaatggtttcaaactactcgatagagaaaagtgtacgtatg
gggcctgggatcagccaggagcttgccggttatacctttaactatattgaaactaagaat
gttgtaggtcctaactacacggctcaacaggggcaggtagaagtcactaaagatggtgag
tttgtcgcactgctaagaccggatcgccgtcagtacaatgttcgtactatggacatgaca
gaggctggaatcgattggggattattcagagatctctatatcacaatgggtgatccattg
agtagaactcagtttgctgttcgtctgaactacaagccatttgttcgttggttatggttc
ggaagcatatttatgatggtcggtggtttctttgccgcatctgataagcgttatcgtaca
aagaaagtaacagaggcatcgaaagctgatgctcaaaaagagaaattagctacggcttaa
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