Shewanella sediminis: Ssed_4334
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Entry
Ssed_4334 CDS
T00596
Name
(GenBank) Biotin--(acetyl-CoA-carboxylase) ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sse
Shewanella sediminis
Pathway
sse00780
Biotin metabolism
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Ssed_4334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sse03000
]
Ssed_4334
Enzymes [BR:
sse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
Ssed_4334
Transcription factors [BR:
sse03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ssed_4334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
Rrf2
HTH_24
HTH_36
HTH_20
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABV38936
UniProt:
A8G1G3
LinkDB
All DBs
Position
complement(5304812..5305774)
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AA seq
320 aa
AA seq
DB search
MIEQWERKRAIIATLNSGGFVSGEVLAKQAGISRTAIGKHISALEEYGVEIYSVKGKGYK
LANTISLIDEKKLTSAINQRCFYFDEISSTNAFFLKNVDELNSGDICVTEYQSAGRGRRG
RTWVSPYGCHLYCSMYWNLSQGMAQAAGLSLVVACSLVKTLESFKIEGLGVKWPNDIYLN
ERKLAGVLIEMNGQADSHCHLVIGIGINVSMSEAQGEKIDQPWSDLSLQNPSLNKTDLMV
ALQKQLHQDLIEFESHGMKVFLPRWQEIDIFYGKEVKLLMGENQVLGICRGIDETGAILL
DTNNGLEAFVGGEISLRSAV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaatgggaaagaaaacgcgccatcatagcgacgcttaactccggaggcttt
gtgtctggtgaggtcttggccaagcaagctggaatatcaagaactgcgattggtaaacac
atttccgcgttagaagagtacggcgtcgaaatctatagtgttaaaggtaagggctacaaa
cttgctaatactatttcactcatagatgaaaagaaattaacatcagcaattaatcaacgt
tgtttttatttcgatgaaatctcgagcactaatgcatttttccttaagaacgtcgatgag
cttaactctggtgatatctgtgtaacagaatatcaatcggccggcagaggaagacgtgga
agaacttgggtttctccctatggatgccacctttattgttcaatgtactggaacttatct
caaggaatggcgcaggcggcgggcttaagtcttgtcgttgcctgttctttagtaaagaca
ttggagtccttcaaaatcgagggcctaggtgtcaagtggcctaatgacatctaccttaat
gaaaggaaacttgccggcgtattgatagagatgaatgggcaggcggatagccattgtcac
ttggtcatagggatcgggataaatgtttcgatgtctgaagctcagggtgagaagattgat
caaccatggagtgacttgtcacttcagaacccaagtctgaataagacagatttgatggtg
gccctacagaaacaactacatcaagacctgatcgaattcgaatctcatggtatgaaagtc
ttcttaccaaggtggcaagagatagatatcttttatggtaaagaggtcaagttattgatg
ggagaaaatcaagtgcttggtatctgtcgcggaatcgatgagactggagctattctgctc
gatacaaataatgggttagaagcctttgttggcggtgaaatcagtctaagaagcgctgtc
tag
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