Shewanella sediminis: Ssed_4338
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Entry
Ssed_4338 CDS
T00596
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sse03016
]
Ssed_4338
Enzymes [BR:
sse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
Ssed_4338
Transfer RNA biogenesis [BR:
sse03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Ssed_4338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
Methyltransf_31
TRM
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
ABV38940
UniProt:
A8G1G7
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All DBs
Position
5315003..5316100
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AA seq
365 aa
AA seq
DB search
MNLAAMDPNTYDAQLEEKRIKLEQIFTDFDTPKLEVFSSEPAHYRMRAEFRIWHDGEDMY
YYMFDKALDSKVRCDQFLPASELINKVMPALMEELRPNPTLRHRLFQIDFLSTLSGEILV
SLLYHKQLDAQWEIEAKALKEKLAATFNINIIGRARKQKLIIDKDFVIESLTVNNEQLQY
HQIENSFTQPNGKVSVKMLEWAIDVTKNSQGDLLELYCGNGNFSIALAQNFDRVLATELA
KPSVESAQYNIKINKIDNLQIIRMSAEDFTDAMAKKRTFRRLEGIDLDSYNCNTIFVDPP
RAGMDPDTVKLVQGYDRIVYISCNPNTLIDNLAELSKTHKITRFALFDQFPYTDHMESGV
FLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcagcaatggatcctaatacctatgatgcgcaactcgaagaaaaacgtatc
aagctggaacagatattcactgattttgatacgccaaagctagaagtttttagttccgaa
ccggctcattatcgtatgcgtgccgaattccgcatatggcatgacggtgaggacatgtac
tactacatgtttgataaagcactcgacagcaaagtccgttgcgatcaatttctccctgct
agtgaattgatcaataaggtgatgccagcccttatggaagagttaaggcccaatccaact
ctgagacataggttattccagatagatttcttatcaacgcttagtggcgaaatcttagtg
tctttgttgtatcacaagcaacttgatgcacagtgggagattgaagctaaagccttaaaa
gagaagttagcagccactttcaacatcaatattattggtcgagctcgtaaacagaaactg
atcatagacaaagactttgtcatcgagtcattaactgtcaataacgaacagcttcaatat
catcagattgaaaatagctttacccaacctaatggtaaagtctcggtgaagatgttggag
tgggctattgatgtcactaaaaatagccaaggcgatctactggagctttattgtggtaat
ggtaatttttcaattgccctggcacaaaatttcgatcgcgtattagccaccgaactcgca
aaaccttcggttgagtccgcacaatacaatatcaagataaataagatcgacaacctgcag
atcatccgtatgtcggcagaagattttaccgatgcaatggcaaagaagcgtaccttcaga
cgcctggaggggatcgatttagatagctacaactgtaataccatcttcgttgacccacct
agagcaggtatggatccagataccgttaagctggtgcaaggctacgatcgtatcgtttat
atctcttgtaacccgaatactttaatcgacaacttagctgagctgagcaaaacacataag
atcacgcgctttgctctatttgaccaattcccatatacagatcatatggaatcgggagtc
ttcttagagagacgctaa
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