Shewanella sediminis: Ssed_4392
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Entry
Ssed_4392 CDS
T00596
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K02483
two-component system, OmpR family, response regulator
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sse02022
]
Ssed_4392
Two-component system [BR:
sse02022
]
OmpR family
Unclassified
Ssed_4392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
PuR_N
ClpS
Motif
Other DBs
NCBI-ProteinID:
ABV38994
UniProt:
A8G1M1
LinkDB
All DBs
Position
complement(5374001..5374678)
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AA seq
225 aa
AA seq
DB search
MKILLVEDDATTIEYVVKGFMEQGHNIETASDGHQGLLLATSMKYDLVILDRMLPQLDGL
KLLAALRATGSQTPVLILSALSHVDERVKGLRAGGDDYMTKPFAFSELLVRAEKLMQRGF
SQPADTELSVGNLVMELLTRKVTLDGTELMLQPKEFQLLKYLMEHPNQVISRTLLFEAVW
DYHFDPRTNVIDVHIAKLRRKFEELGFGELIETVRGAGYRLRQGN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttacttgtagaagatgatgcaaccaccatcgaatatgtggttaaaggcttt
atggagcaggggcataacatcgagaccgcaagtgatggtcatcagggcttgctcctcgcg
acgagtatgaagtatgacctggtgatattagaccgtatgctacctcaacttgacggatta
aagctgcttgctgcactcagggcaacaggtagtcagacaccggtattgatcctttcggcg
ctaagccatgtcgatgagcgtgtaaaaggcttgagagcgggtggcgatgactatatgact
aagccctttgccttctctgagttgcttgttcgcgccgaaaaactgatgcagagaggcttt
tctcagcctgccgataccgagctgtccgtgggaaacctggtgatggagttgcttacccgt
aaagtgaccttagacggtaccgagcttatgctgcaacctaaagagtttcaactgttaaag
tacttgatggaacacccaaaccaagttattagccgcacactgttattcgaagccgtgtgg
gattaccattttgatccccgtaccaatgtgattgatgttcatatcgctaagctcagacgc
aaatttgaagagctgggatttggtgagttgattgaaaccgttcgaggtgcaggttatcgc
ctccgccaagggaattaa
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