Shewanella sediminis: Ssed_4419
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Entry
Ssed_4419 CDS
T00596
Name
(GenBank) formate dehydrogenase, gamma subunit
KO
K00127
formate dehydrogenase subunit gamma
Organism
sse
Shewanella sediminis
Pathway
sse00630
Glyoxylate and dicarboxylate metabolism
sse00680
Methane metabolism
sse01100
Metabolic pathways
sse01120
Microbial metabolism in diverse environments
sse01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ssed_4419
09102 Energy metabolism
00680 Methane metabolism
Ssed_4419
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Gene cluster
GFIT
Motif
Pfam:
Ni_hydr_CYTB
DUF4405
Motif
Other DBs
NCBI-ProteinID:
ABV39021
UniProt:
A8G1P8
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All DBs
Position
complement(5401581..5402588)
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AA seq
335 aa
AA seq
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MLLKSLRGLFALLVLPFVLTMGLGLSTSALAVDDQTSQQMANSSEVDLWHAVKTGDSGYT
TKKGVESGVLINVSAIEATEIKNQYLTPAMGLAVLGVFGAFIVFYFVNGPSKLSKGYSGK
MVLRWSKADLWIHWVLAISCLGLILTGINIMLGKHILEPYVGEGMWAGLIYASKFIHDYV
GPVFIISWILCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTLFGLFISVSGMMLVLPGLDLPREASFAALLIHAISAIIIIAFTIVHIWMATVLSEGG
MECMKSGYCDENWAVQHHNLWYDEIKANGTLEYKD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaaatcactgcgtggcctgtttgctttgctggttttaccttttgttttaact
atggggttaggtttgagcacatcggcgcttgccgtcgacgatcaaaccagccaacagatg
gccaatagcagcgaggtcgatctatggcatgctgttaagactggcgattctggttatacc
accaagaagggcgttgaaagtggcgttctgataaacgtatcggctattgaggcaactgag
ataaagaatcaatacctcactccagcgatgggtttggcggtattgggtgtatttggtgct
ttcatcgtcttctattttgttaatggtccctctaagttaagtaagggctactctggcaag
atggtattacgttggtcaaaggcagacttgtggattcactgggtattagctatctcttgt
ctggggctgatacttacaggtatcaacatcatgctgggtaaacatattctagagccttat
gtgggtgaaggaatgtgggccggactgatttatgccagtaagtttatccatgattacgtg
ggtcctgtgtttatcatatcttggatcttgtgcgtcgttaaatggatgcctctgcagaca
tttaagatgtatgacctgaaatggttcttagtcgttggtggttacatcaacttcggccca
ttcaagggtaagcatccggatagtggttttgctaatgccggtgagaaaatgtggttctgg
acacttaccctgttcggactgttcatcagtgtttcaggcatgatgttagtcttgcctggc
ttagatcttcctcgtgaagcgtcttttgcggcactgctgatacacgctatcagcgcgatc
attatcatcgcatttactatcgtacatatttggatggcgacagtattgagtgaaggtggt
atggagtgtatgaagtctggttattgtgatgagaactgggccgtacaacaccacaacctt
tggtatgatgagatcaaggctaacggtacgttggaatacaaagattaa
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