Shewanella sediminis: Ssed_4442
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Entry
Ssed_4442 CDS
T00596
Name
(GenBank) MscS mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_4442
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_4442
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
HemS
Motif
Other DBs
NCBI-ProteinID:
ABV39044
UniProt:
A8G1S1
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Position
complement(5428304..5429566)
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AA seq
420 aa
AA seq
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MDQELRLQISQWLSDWGVNSTPSDGVSTSVLVFASLVLAMIAYLIVRRGVVRTMNIVIQR
SKVNWDDIFMGHNVLEKFSYIVPALVLDLLLPIALTEHHLMSSLMDRLLSVSIVIILIRA
VYSALDAFNEIADVNLVSRRLPIKSFVQLFKLFLFFVAVIISISVIADQSPLYFLSGLGV
ATGLVMLVFRDTILGFVAGIQLAANRMVSTGDWIQMDKYGADGAVEEVSLTTVKVRNWDQ
TITMIPAYALVSDAFKNWRGMSESGGRRIKRSVSIDIHSIGFLSEEERVRLSKINHLKAY
FAAKNDELADFNSQVDDADMPVNSRQLTNIGTFRAYLKEFVSNHDKIHKDMTLLVRQLAP
TSEGVPIEIYIFTNDTRWGFYEGIQGDIFDHIFAILPEFGLRVFQGPTGSDIRSLKADKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaagaattaagattacagatctctcagtggttatcggactggggggtaaacagt
acgccatcggatggtgtttccacatcggtattggtctttgccagcttggtgctggcaatg
atcgcctacctgattgtcaggagaggtgtcgtccgtacgatgaacatcgtcatccagcgc
tctaaagttaactgggacgatatcttcatggggcacaatgtgttggagaagttttcctat
atcgtgccggcgctggtgctcgaccttctgttacccatcgcgctcaccgaacatcatctg
atgagctctctgatggatcgcctgctgagtgtgagtatcgttatcatacttatccgcgcg
gtatatagtgccctggatgccttcaatgagattgccgatgtaaatctggtcagtcgacgg
cttcccataaagagtttcgtgcagctgtttaagttattcctcttctttgtggccgtcatc
atctccatctcggtgattgcggatcagtctccgctctacttcctcagcggtttaggtgtc
gcgactggtttggttatgttggtcttcagggacactatcttagggtttgtcgctgggata
cagttggcggcgaaccgcatggtgagcaccggcgattggatccagatggataaatatggg
gccgatggtgcggttgaagaggtctctttgacgaccgttaaggtgcgtaactgggatcag
accatcactatgatccccgcctatgccctggtctctgacgcatttaaaaactggcgcggc
atgtctgagtccggtggacgacgcattaagcgttctgtctccatcgacattcactcgatc
ggcttcctctctgaagaggagagagttcgcctcagtaagatcaatcatcttaaggcctac
tttgcggctaagaatgatgagttagccgacttcaatagtcaggtcgatgatgccgatatg
cctgttaacagtcgacaattgacgaatatcggtacttttagggcctatttgaaggagttc
gtgagtaatcacgacaagatccataaagatatgaccctgctggtgcgtcagttagcgccg
acatcggaaggggtaccgatagagatctatatctttaccaacgatacccgttgggggttc
tatgaaggaattcagggggatatcttcgatcatatctttgccatattaccggagttcggc
ttgagggttttccagggaccgacaggttcagatatcaggagtttgaaagccgataagcgt
taa
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