Streptomyces secundicynarae: ABZO29_13245
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Entry
ABZO29_13245 CDS
T11405
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ssec Streptomyces secundicynarae
Pathway
ssec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABZO29_13245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssec03021
]
ABZO29_13245
Transcription machinery [BR:
ssec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABZO29_13245
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCW09238
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Position
complement(2888011..2889555)
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AA seq
514 aa
AA seq
DB search
MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKTVTTRKATATTAAPAAPADP
PAVDPAEEAAPAKKAAEKKVVAKKAAAKKTVAKKTAAKKTSAKKDDAELLEEEVLEETPK
GGEEPEGAESAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELA
KRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRG
MLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVE
VINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSE
FGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGK
VYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagctgaccagattccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagcccaagcgcacccga
aagagcgtcgcagcgaagagtccggccaagcgcaccgccaccaagacggtggcagcgaag
acggtgaccaccaggaaggccaccgccaccacggccgccccggccgcgcctgccgaccct
cccgctgtcgatcccgccgaggaagccgcgccggccaagaaggccgctgagaagaaggtc
gtcgccaagaaggcggcggcgaagaagacggtcgccaagaagacggcggccaagaagacc
agtgcgaagaaggacgacgccgagctgctcgaggaggaggtcctcgaggaaacccccaag
ggcggcgaagagcccgagggcgccgagagcgcaggtttcgtgctctccgacgaggacgag
gacgacgcgccggcccagcaggtcgccgcggccggcgccacggccgacccggtcaaggac
tacctcaagcagatcggcaaggtccccctgctcaacgccgagcaggaggtcgagctcgcc
aagcggatcgaggccggtctgttcgccgaggacaagctggccaacgccgacaagctcgct
ccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgcgccaagaaccac
ctcctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggccgcggc
atgctcttcctggacctcatccaggagggcaacctcggtctgatccgcgcggtcgagaag
ttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcaggcg
atcacccgcgcgatggccgaccaggcgcgcaccatccgtatcccggtgcacatggtcgag
gtcatcaacaagctcgcgcgcgtgcagcgccagatgctccaggacctgggccgcgagccc
accccggaggagctggccaaggagctcgacatgaccccggagaaggtcatcgaggtccag
aagtacggccgcgagcccatctcgctgcacaccccgctgggtgaggacggcgacagcgag
ttcggtgacctcatcgaggactccgaggccgtcgtcccggccgacgcggtcagcttcacg
ctcctccaggagcagctgcactccgtgctcgacaccctgtccgagcgtgaggccggtgtg
gtctccatgcggttcggtctcaccgacggtcagccgaagaccctcgacgagatcggcaag
gtgtacggcgtcacgcgcgagcgcatccgccagatcgagtccaagaccatgtcgaagctg
cgccacccgtcgcgctcccaggtcctgcgcgactacctcgactag
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