Streptomyces secundicynarae: ABZO29_22425
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Entry
ABZO29_22425 CDS
T11405
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ssec Streptomyces secundicynarae
Brite
KEGG Orthology (KO) [BR:
ssec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssec03032
]
ABZO29_22425 (gyrB)
03400 DNA repair and recombination proteins [BR:
ssec03400
]
ABZO29_22425 (gyrB)
Enzymes [BR:
ssec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABZO29_22425 (gyrB)
DNA replication proteins [BR:
ssec03032
]
Prokaryotic type
DNA Topoisomerases
ABZO29_22425 (gyrB)
DNA repair and recombination proteins [BR:
ssec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABZO29_22425 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCW10895
LinkDB
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Position
complement(4883520..4885592)
Genome browser
AA seq
690 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTEAPAANAEASVTVSYDASAITVLEGLDAVRKRPGMYIG
STGERGLHHLVYEVVDNSVDEALAGHADTIDVTILSDGGVRVVDNGRGIPVGIVPSEGKP
AVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSSKVAVEVKTDGHRWTQDYKMGV
PTAALTKNEATDETGTSVTFWADGDIFETTDYSFETLSRRFQEMAFLNKGLTIKLTDERE
SAKATAGADEAGADEKDEVKTVTYHYEGGIVDFVKYLNSRKGDVVHPTVIDLEAEDRDKS
LSLEVAMQWNSGYSEGVYSFANIIHTHEGGTHEEGFRAALTNLINKYARDKKLLREKDDN
LTGDDIREGLTAIISVKLSEPQFEGQTKTKLGNTEAKTFVQKAVYEHLNDWLDRNPNEAA
DIVRKGIQAATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAG
GSAKSGRNPQYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIEKLRY
HKIILMADADVDGQHISTLLLTFLFRFMRPLVEAGHVYLSRPPLYKLKWGRDDIEYAYSD
RERDALIEMGRQRGKRVREDSIQRFKGLGEMNAEELRVTTMDQEHRVLGQVTLDDAAQAD
DLFSVLMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccaccgaggctccggccgcaaacgccgaggcctcagtcacggtgtcgtacgacgccagt
gccatcaccgtcctcgagggtctggacgcggtccgcaagcgacccggtatgtacatcggc
tcgaccggtgagcgcggtctgcaccacctcgtgtacgaggtggtcgacaactcggtcgac
gaggcactggccggccacgcggacaccatcgatgtgacgatcctgtccgacggcggcgtg
cgcgtcgtcgacaacggccgtggcatcccggtcggcatcgtcccgtccgagggcaagccg
gccgtcgaagtcgtgctgaccgtgctgcacgcgggcggcaagttcggcggcggcggctac
gcggtctccggtggtctgcacggcgtgggtgtgtccgtcgtgaacgcgctgtcgtcgaag
gtcgccgtcgaggtcaagaccgacggtcaccgctggacgcaggactacaagatgggcgtc
ccgacggctgcgctgaccaagaacgaggccacggacgagacggggacgtcggtcaccttc
tgggccgacggcgacatcttcgagaccacggactactccttcgagacgctttcgcggcgc
ttccaggagatggcgttcctcaacaagggtttgacgatcaaactcaccgacgagcgcgag
tcggcgaaggcgaccgccggtgcggacgaggcgggtgcggacgagaaggacgaggtcaag
accgtcacgtaccactacgagggcggcatcgtcgacttcgtgaagtacctcaactcccgc
aagggggacgtggtgcaccccaccgtcatcgacctggaggcggaggacagggacaagagc
ctgtccctcgaggtcgccatgcagtggaacagcggttacagcgagggcgtgtactccttc
gccaacatcatccacacgcacgagggcggtacccacgaagagggcttccgcgcggcgctc
accaacctgatcaacaagtacgcgcgcgacaagaagctgctgcgcgagaaggacgacaac
ctcacgggtgacgacatccgcgagggtctgacggcgatcatctcggtgaagctcagcgag
ccgcagttcgagggccagacgaagaccaagctgggcaacacggaggcgaagaccttcgtg
cagaaggccgtctacgagcacctcaacgactggctggaccgcaacccgaacgaggccgcg
gacatcgtgcgcaagggcatccaggcggccaccgcgcgcgtggcggcccgcaaggcgcgc
gatctgacccgtcgcaagggtctgctggagtcggcctcgctgccgggcaagctctccgac
tgccagtcgaacgatcccaccaagtgcgagatcttcatcgtcgagggtgactccgccggc
ggctcggccaagtccggccgcaacccgcagtaccaggcgatccttccgatccggggcaag
atcctcaacgtcgagaaggcgcggatcgacaagatcctgcagaaccaggagatccaggcg
ctgatctccgccttcggcacgggtgtgcacgaggacttcgacatcgagaagctgcgctat
cacaagatcatcctgatggcggacgccgacgtcgacggccagcacatcagcaccctgctg
ctgaccttcctgttccgcttcatgcggccgctggtcgaggccgggcacgtgtacctctcc
cgtcccccgctctacaagctcaagtggggtcgggacgacatcgagtacgcgtactccgac
cgcgagcgcgacgcgctgatcgagatgggccgtcagcgcggcaagcgggtgcgcgaggac
tcgatccagcgcttcaagggtctcggcgagatgaacgccgaggagctgcgggtcacgacg
atggaccaggagcaccgcgtcctcggccaggtcaccctcgacgacgcggcccaggccgac
gacctgttctcggtcctgatgggcgaggacgtcgaagcgcgccgtgccttcatccagcgc
aacgccaaggacgtccgcttcctcgacatctga
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