Streptomyces secundicynarae: ABZO29_28035
Help
Entry
ABZO29_28035 CDS
T11405
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssec Streptomyces secundicynarae
Pathway
ssec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABZO29_28035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssec03400
]
ABZO29_28035
Enzymes [BR:
ssec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABZO29_28035
DNA repair and recombination proteins [BR:
ssec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABZO29_28035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
NAT10_TcmA_helicase
PhoH
PIF1
AAA_16
NPHP3_N
TraI_hel_assoc_N
nSTAND3
DEAD
AAA
UvrD_C
TrwB_AAD_bind
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
XCW11888
LinkDB
All DBs
Position
6092817..6095075
Genome browser
AA seq
752 aa
AA seq
DB search
MSNQVGNAASATAARHLAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGA
QVGESLRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQ
HFGLDTLQIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVR
IYKKYGDASISVVRNQPYRLAADVWGIGFLTADRIAQSVGIPHDSPERVKAGLQYALSQS
TDQGHCFLPEEQLIADAVKLLQVDTGLVIECLGELAQVPEDGSDPGVVREKVPGPDGTPV
TAIWLVPFHRAELSLSAQLLRLLRTDEDRMPGFRQVTWDKALTWLKGRTGADLAPEQEAA
VKLALTEKVAVLTGGPGCGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEAS
TVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVD
QLPSVGAGEVLRDLLADGSPVPAVRLTRVFRQAQQSGVVTNAHRINSGKHPVTDGMKDFF
LFVEDDTEEAGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITP
GRPDLSEKRFGGRVFRVGDKVTQIRNNYEKGSNGVFNGTVGVVTSLDPVDQRLTVLTDED
EEVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLV
VLVGSRKAIAQAVRTVSAGRRCTALDFRLSGS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcaggtggggaacgcggcgtcggctaccgcagcacggcacttggccgtgctc
gaaggggtcctcgagcggatcacgtacgccaacgaggagaacggctacacggtcgcccgg
gtcgacaccggccgaggcggcggcgatctcctcaccgtcgtgggcgcgctgctgggcgcc
caggtcggcgagtccctgcgcatggagggccgctggggctcgcacccgcaatacggcaag
cagttcaccgtcgagaactacacgaccgtgctgccggccaccgtccagggcatccgccgc
tacctgggttcggggctggtcaagggcatcggccccgtcttcgccgaccgcatcacccag
cacttcggcctggacaccctgcagatcatcgaggaggagccgaaacgcctcatcgaggtc
cccggcctggggcccaagcgcaccaagaagatcgccgacgcctgggaggagcagaaggcg
atcaaggaggtcatgctcttcctccagacggtggaggtgtccacgtcgatcgccgtgcgc
atctacaagaagtacggcgacgcctcgatctccgtcgtcaggaaccagccctaccggctg
gcggcggacgtatggggcatcggcttcctcaccgccgacaggatcgcccagtcggtcggc
atcccgcacgacagcccggagcgcgtcaaggcgggcctgcagtacgcgctgtcgcagtcc
accgaccagggccactgcttccttccggaggaacagctgatcgcggacgcggtcaagctg
ctgcaggtcgacaccgggctcgtcatcgagtgcctcggcgagctggcccaggtgccggag
gacggctccgatccgggtgtcgtacgggagaaggtgccgggaccggacggcacccccgtc
accgcgatctggctcgtccccttccaccgggccgaactctccctctccgctcagctgttg
cgcctcctgcgcacggacgaggaccgtatgccgggcttccggcaggtcacctgggacaag
gcgctgacctggctgaagggccgtacgggcgccgacctcgcccccgagcaggaggccgcc
gtcaagctggcgctgaccgagaaggtcgccgtcctcaccggcgggcccggctgcggcaag
tccttcacggtccgttccgtcgtggagctggcccgcgccaagaaggcgaaggtcgtgctc
gccgcccccaccggccgcgccgccaagcgcctcgccgagctgaccggagccgaggcgtcc
accgtccaccggctgcttgagctcaagcccggcggcgacgcggcctacgacagggaccgc
ccgctggacgccgacctggtggtcgtggacgaggcctccatgctggacctcctcctcgcc
aacaagctggtgaaggcggtcccgccgggggcgcacctgctgttcgtcggagatgtcgac
cagctgcccagcgtcggcgccggcgaggtgctgcgcgacctgctcgccgacggcagcccg
gtccccgcggtccgcctcacccgggtcttccggcaggcccagcagtccggcgtggtgacc
aacgcgcaccggatcaactccgggaagcacccggtcaccgacggcatgaaggacttcttc
ctgttcgtcgaggacgacacggaggaggccgggcggctcaccgtggacgtggccgcccgt
cgtatcccggccaggttcgggctcgacccgcgccgggacgtccaggtgctcgcccccatg
caccgcggtcccgccggcgcgggcacgctcaacggcctgctccagcaggccatcacaccc
ggccgcccggacctgtccgagaagcggttcggcggccgggtcttccgcgtcggcgacaag
gtcacgcagattcgcaacaattacgagaaggggagcaacggtgtcttcaacggcaccgtg
ggcgtggtcacctcgctcgacccggtcgaccagcgcctgacggtgctgacggacgaggac
gaggaggtcccgtacgaattcgatgaactggacgaactggcacatgcgtacgcggtgacc
attcaccgctcccagggaagtgaatatcccgccgtggtgatcccggtcaccaccggcgcc
tggatgatgctccagcggaacctgctctacaccgccgtgacccgcgccaagaagctggtc
gtccttgtcggttcacgcaaggcgatcgcgcaggcggtgcgcaccgtgtcggcgggacgc
cggtgcacggcactcgacttccggctctccggctcctga
DBGET
integrated database retrieval system
