Streptomyces secundicynarae: ABZO29_28135
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Entry
ABZO29_28135 CDS
T11405
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssec Streptomyces secundicynarae
Pathway
ssec00061
Fatty acid biosynthesis
ssec00071
Fatty acid degradation
ssec01100
Metabolic pathways
ssec01212
Fatty acid metabolism
ssec02024
Quorum sensing
ssec04146
Peroxisome
Module
ssec_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssec00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABZO29_28135
00071 Fatty acid degradation
ABZO29_28135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABZO29_28135
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABZO29_28135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssec01004
]
ABZO29_28135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssec04147
]
ABZO29_28135
Enzymes [BR:
ssec01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABZO29_28135
Lipid biosynthesis proteins [BR:
ssec01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABZO29_28135
Exosome [BR:
ssec04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABZO29_28135
Exosomal proteins of breast cancer cells
ABZO29_28135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
GH3
Motif
Other DBs
NCBI-ProteinID:
XCW11905
LinkDB
All DBs
Position
6117926..6119848
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AA seq
640 aa
AA seq
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MGVRKDLKRAKQRTDLAARTKVELIRDESGTVREARTAPMAARPTTGSIADLPFTNAAEA
PDTVIIRRRGENGTWHPVTAAAFAREVTAVAKGLVAAGLEPGGRVAVMSRTRYEWTVLDF
AVWAAGGQTVPVYATSSAEQVEWIVRDSGARIVVTETPENTDTVTTGTARHPQPPQVWQL
DGDGLADLTALGRDLPDEEVTKRRTALTPDTVATICYTSGTTGQPKGCVLTHANLHAEAA
NALELLHPVFKAVTGETASTLLFLPLAHIMGRTLQISCLMARIEIGHFPSVRPDELRPAL
KEFRPTFLVGVPYLFERIRDTGRATAEKIGRGASFDRAERIGVRFGKAYLDKFLDRGKGP
GPGLYAAWALYDLLVYRRIRSELGGRMRYAISGGSPLDRDLSLFFYAAGIIVYEGYGLTE
TTAAATLVPPLKPRPGTVGLPVPGTAVRIADDGEVLIKGGVVFGSYWNNPRATDAVLTDE
WFATGDIGSLDEDGYLTITGRKKDILVTSGGKNVSPAVLEDRLRSRPPVGQCLVVGDNRP
FVAALITLDPDAVAHWLSVRGLPADTPMSEVIRDPRMRADVQKAVDHANEAVSRAESIRA
FTLVEGEFNEENGLLTPSLKVKRHAVTAAYADEIEALYRK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtacgcaaggacctgaagcgggcgaaacagcgcaccgacctggccgcccgcacc
aaggtggaactcatcagggacgagtccgggaccgtccgcgaggcccgcaccgcccccatg
gcggcacggcccaccaccggaagcatcgccgacctccccttcaccaacgcggcggaggcc
cccgacaccgtgatcatccgccgccggggagagaacggcacctggcatcccgtgacggcc
gccgccttcgcccgcgaggtcaccgccgtcgccaagggcctcgtcgcggccggcctcgaa
ccgggcggccgcgtcgccgtgatgtcccgcacccgctacgagtggacggtcctggacttc
gccgtctgggcggccggcggccagaccgtccccgtctacgccacctcctccgccgagcag
gtggagtggatcgtccgcgactccggcgcccgcatcgtcgtcaccgagaccccggagaac
accgacacggtcaccaccggcacggcccgccacccgcaacccccgcaggtctggcagctc
gacggagacggactcgccgacctcaccgccctcggccgcgacctccccgacgaggaggtc
accaaacgccgcaccgccctgacccccgacaccgtcgccaccatctgctacacctcgggc
accaccggacaacccaagggctgtgtcctcacccacgccaatctgcacgccgaggccgcc
aacgcgctcgaactgctgcaccccgtcttcaaggcggtcaccggtgagacggcctccacc
ctcctcttcctcccactcgcccacatcatgggccgcaccctgcagatctcctgcctgatg
gcccgcatcgagatcggccacttcccgagcgtcagacccgacgaactgcgcccggcactc
aaggagttccgcccgaccttcctcgtcggcgtcccgtacctcttcgagcggatccgcgac
accggccgcgccaccgccgagaagatcggccgcggcgcctccttcgaccgtgccgaacgc
atcggggtgcgcttcgggaaggcctacctcgacaagttcctcgaccggggcaagggcccg
ggacccggcctgtacgccgcctgggcgctgtacgacctgctggtctaccgccgcatccgc
agcgaactcggcggccgtatgcgctacgccatcagcggcggttccccgctcgaccgcgac
ctcagtctcttcttctacgcggccggcatcatcgtctacgagggctacggcctgaccgag
accaccgccgccgccaccctcgtgcccccgctgaagccccgcccgggcacggtcggcctc
ccggtccccggcaccgcggtccgcatcgccgacgacggcgaggtgctcatcaagggcggg
gtcgtcttcggctcgtactggaacaacccacgggccacggacgcggtgctcaccgacgag
tggttcgccaccggcgacatcggctccctggacgaggacggctacctcaccatcaccggc
cgcaagaaggacatcctcgtcacctccggcggcaagaacgtctctccggccgtcctcgag
gaccgtctgcgcagccgcccgcccgtcggccagtgcctcgtcgtcggtgacaaccgcccc
ttcgtcgccgccctgatcaccctcgaccccgacgcggtcgcccactggctctcggtacgc
ggactgcccgcggacaccccgatgtccgaggtgatccgtgatccccggatgcgcgccgac
gtccagaaagccgtggaccacgccaacgaggccgtctcgcgcgccgagtcgatccgcgcc
ttcaccctggtcgagggcgagttcaacgaggagaacggtctgctcacgccctccctgaag
gtgaagcggcacgcggtgacggccgcctacgcggacgagatcgaggcgctgtaccgcaag
tga
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