Sphingomonas sediminicola: H9L14_01000
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Entry
H9L14_01000 CDS
T07077
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssed03021
]
H9L14_01000 (nusA)
03009 Ribosome biogenesis [BR:
ssed03009
]
H9L14_01000 (nusA)
Transcription machinery [BR:
ssed03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
H9L14_01000 (nusA)
Ribosome biogenesis [BR:
ssed03009
]
Prokaryotic type
rRNA transcription factors
H9L14_01000 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
HHH_5
KH_1
KH_NusA_C
RAD51D_N
KH_KhpA-B
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QNP46860
LinkDB
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Position
182763..184493
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AA seq
576 aa
AA seq
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MNSLGQAPADRQAHQRNRAAQHRGRRHHPDCRGLTHGHCRPPVASANKAELLAIADAVAR
EKLIDRGIVIEAMEDAIQRAARARYGAENDIRAKLDGETGDLRLWRVLEVVEEVEDHFKQ
IDPKGAQKLQKDAAIGDFIVDPLPPIEFGRIAAQAAKQVIFQKVRDAERERQHEEFKDRV
GEVITGVVKRVEFGHVVVDLGRAEGVIRRDQQIPREMVRVGDRIRSLILRVSREARGPQI
FLSRAHPDFMKKLFAQEVPEIYDSIIEIKAAARDPGSRAKIGVISHDSSIDPVGACVGMK
GSRVQAVVQELQGEKIDIIPWSDDLATFVVNALQPATVSRVVIDEEESRIEVVVPDDQLS
LAIGRRGQNVRLASQLTSSQIDILTEADASEKRQREFMERTEMFQSELDVDETLSQLLVA
EGFTSLEEVAYVTLDEIASIEGLDDEIAGELQSRAAEALERREAASREERRALGVEDALA
ELPHLTEQMLVTLGKAGIKTLDDLADLATDELIQKKRQEPRRRAENAPKRAEDKGGLLAD
YSLTEEQGNEIIMAARAHWFEDEPKTEEAADAESSQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atcaattcactcggccaagctcctgctgaccgacaagctcatcaacgcaaccgcgccgct
cagcaccgagggcgccgacaccatccagactgtagaggactaacacatggccactgccgc
ccgcccgtcgcatcagcgaacaaggccgagctgctcgcaattgccgacgcggttgcccgt
gagaagctgatcgatcgcggcatcgtcatcgaggcgatggaagacgcgatccagcgcgcc
gcccgtgcccgctacggcgccgagaacgatattcgcgcaaagctcgacggcgagaccggc
gaccttcgtctgtggcgcgtcctcgaagtcgtcgaagaagtcgaggatcatttcaagcag
atcgacccgaagggcgcccagaagctgcaaaaggatgcagccattggcgacttcatcgtc
gatccgctgccgccgatagagttcggccgcatcgctgcccaggccgccaagcaggtgatc
ttccagaaggtccgcgacgccgagcgcgagcgccagcatgaagagttcaaggaccgcgtc
ggcgaggtcatcaccggcgtcgtcaagcgcgtcgagttcggccacgttgtcgttgatctc
ggccgcgccgaaggcgttatccgccgcgaccagcagatcccgcgcgaaatggttcgcgtc
ggcgaccgcatccgttcgctgatccttcgtgtcagccgcgaagcccgcggcccgcaaatc
ttcctgtcgcgcgctcacccggacttcatgaagaagctgttcgcacaggaagtgccggag
atttacgacagcatcatcgagatcaaggccgccgcccgcgacccgggcagccgagccaag
atcggcgttatcagccacgacagctcgatcgacccggtcggcgcctgtgtcggcatgaag
ggcagccgcgttcaggcggtcgtccaggaactccagggcgagaagatcgacatcattcca
tggtcggacgacctcgcgaccttcgtcgtcaacgcgctacaaccggcgacggtcagccgc
gtcgtcatcgacgaggaagagagccgtatcgaggtcgtggttcccgacgaccagctcagc
ctggcgatcggtcgccgcggccagaacgttcgcctagccagccagctgacatcttcgcag
atcgacatcctcaccgaggctgatgcgagcgagaagcgacagcgcgagttcatggaacgc
accgagatgttccagagcgagctcgacgtcgacgagacgctttcgcagctgctggtcgcc
gaaggcttcaccagcctcgaggaagtcgcctacgtcacgctcgacgagattgcgtcgatc
gagggcctcgacgacgaaatcgccggcgagcttcagagccgcgctgccgaagcgctcgag
cgccgcgaagccgcttcgcgcgaggagcgccgtgcccttggcgtcgaggatgctctggcc
gagcttccgcacctcaccgagcagatgctggtgacgctgggcaaggcgggcatcaagacg
ctcgatgatctcgccgatctcgcgaccgacgagctgatccagaagaagcggcaggagccg
cgccgccgcgccgagaacgcgccgaagcgcgccgaggacaagggcggactcctggccgac
tattcgctgaccgaagagcagggcaacgagatcatcatggccgctcgcgcccactggttc
gaggacgagccgaagaccgaggaggccgccgatgcggaatcctcgcaatga
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