Sphingomonas sediminicola: H9L14_01035
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Entry
H9L14_01035 CDS
T07077
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssed03016
]
H9L14_01035 (truB)
Enzymes [BR:
ssed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H9L14_01035 (truB)
Transfer RNA biogenesis [BR:
ssed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H9L14_01035 (truB)
Prokaryotic type
H9L14_01035 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QNP46861
LinkDB
All DBs
Position
189643..190524
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AA seq
293 aa
AA seq
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MNGWIVLDKPVGLGSTQAVSKVKRALRDAGEPKHKVGHGGTLDPLASGVLPIAIGEATKL
CGRMLDASKAYEFTVKFGEETDTLDREGQIVETSAVRPSRDQIETVIGAFTGEIDQIPPA
YSALKVEGKAAYARARAGEQVELKPRKVTIFELRLQETTPDSATFHAHVSKGTYIRSLAR
DFAHALNTVGHVTMLRRTRAGPFGLEKAISLDFLAEAAKARRLIGAVLPLEAALDDIPAL
PITPDQAQLLRFGQRLIGFPEKPGLQLATEGGRPVALVEATADGLKVVRGFNI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atcaacggctggatcgtgctcgacaagccggtcgggcttggctcgacgcaggccgtgtcg
aaggtaaagcgcgcgcttcgcgatgcgggagaacccaagcacaaggtcggtcacggcggc
acgctcgatccgctcgccagcggcgtgctcccgatagctatcggcgaagccaccaagctg
tgcggacgaatgctggacgcgagcaaggcgtatgagttcacggtcaagttcggcgaggag
accgacacgctcgacagggaagggcaaattgtcgagacgagcgccgtccgtccgtcccgc
gaccagatcgagaccgtcatcggagccttcaccggcgagatcgaccagattccaccggcc
tactccgcgctgaaagtggaagggaaggcggcttacgcccgcgcccgcgctggcgaacag
gtcgaactcaagccgcgcaaggtcaccattttcgagctcaggctccaagaaaccacgccc
gacagcgcgaccttccacgcgcacgtatcgaaaggcacctacatccgctccctcgcccgg
gacttcgcccacgcattgaacacggtcggccacgtcaccatgttaaggaggacgcgggcc
ggcccgttcgggctcgaaaaggccatttcactggactttcttgccgaagccgctaaggcg
cggcggctgattggggcggtacttccgctggaagcggcgctggacgacatcccggccctc
cccatcactcccgaccaggcacaactgctccgcttcggacagcgcctgatcggtttcccc
gaaaagccggggcttcaactggcgacagagggcggacgcccggtcgctctcgttgaagca
acggccgacggcctgaaggtcgtccgggggttcaacatctag
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