Sphingomonas sediminicola: H9L14_01045
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Entry
H9L14_01045 CDS
T07077
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssed
Sphingomonas sediminicola
Pathway
ssed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L14_01045 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssed03019
]
H9L14_01045 (pnp)
03016 Transfer RNA biogenesis [BR:
ssed03016
]
H9L14_01045 (pnp)
Enzymes [BR:
ssed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H9L14_01045 (pnp)
Messenger RNA biogenesis [BR:
ssed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9L14_01045 (pnp)
Transfer RNA biogenesis [BR:
ssed03016
]
Prokaryotic type
tRNA degradation factors
H9L14_01045 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QNP45923
UniProt:
A0ABX6TB34
LinkDB
All DBs
Position
190976..193360
Genome browser
AA seq
794 aa
AA seq
DB search
MFKIHTVETEIGGKTLKLETGHVARQADGAVIATLGETVVLCAVTAAKSVKPGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEVLVIAQVLSY
DGENEPDVLAMIAASTALTISGVPFMGPIGAARVGFVDGEYILNPTQAQIAEGQLDLVMA
GTPNAVMMVESEAKELSEEQMLGAVMFGHAASQKICNLIIDLAEKAAKDPWELAQSDDKA
AVKDKLKKLVGADIDAAYRLTNKSERSAALNAAREKAKEAFAEADPQEQLIAGKAVKGLE
ADIVRTAILKEGRRIDGRDTKTVRPIEAMVHFLPRTHGSALFTRGETQAIVTTTLGTKEA
EQMIDGLEGLSYQRFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRAIHPMLPSVEEF
PYTIRVLSDITESNGSSSMATVCGASLALMDAGVPLKRPVAGIAMGLILEGKDFAVISDI
LGDEDHLGDMDFKVAGTSEGVTSLQMDIKVAGITEEIMKTALAQAKDGRAHILGEMAKAL
DHTREELSAHAPRIETMSIPKDKIREVIGTGGKVIREIVAETGAKVDIDDDGTIKIASSD
PAKIEAARNWIRGIVAEPEPGTIYTGKVASLVDFGAFVTFMPGKDGLVHVSEIKNERVEN
VRDVLTEGQEVKVKLLEVDQRGKVRLSMRLVDQETGEELPDTRPPREPREGGDRGPRGDR
GDRHRGGGRDRGGRDDRGPRGPRGDRDRGPRDDRGPRGEGRGDRGPRREREGGENEGNAP
EFAPAFLTGGNDED
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaattcatactgttgaaaccgagatcggcggcaagacgctgaagctcgaaacg
ggccatgttgcccgccaggccgacggcgcggtcatcgcgaccctcggcgaaaccgtggtg
ctttgcgcggtcaccgccgcaaagtcggtcaagccggggcaggacttcttcccgctgacc
gtccactaccaggagaagttttccgccgccggccgtatcccgggcggcttcttcaagcgt
gagcgtggagcgaccgaaaaggaaacgctgaccagccgcctgatcgaccgcccgatccgc
ccgctcttccccgaaggcttctacaacgaagtcctcgtgatcgcgcaggtcctttcctac
gacggcgagaacgagcccgacgtcctcgcgatgatcgccgcttcgaccgcgctgacgatt
tccggcgtgcccttcatgggcccgatcggcgccgcccgcgtcggcttcgttgacggggag
tacatcctcaacccgacccaggcgcagatcgccgaaggtcagctcgatctcgtcatggcc
ggcactccgaacgccgtgatgatggtggagtccgaggccaaggaactaagcgaagagcag
atgctcggcgccgtcatgttcggccacgccgccagccagaagatctgcaacctcatcatc
gatctggccgagaaggccgcgaaggatccgtgggagctcgcgcagagcgacgacaaggcc
gcggttaaggacaagctcaagaagctcgtcggagccgacatcgacgccgcctaccgcctg
accaacaagtcggagcgctcggctgcactcaacgccgcccgcgaaaaggccaaggaagcc
ttcgccgaagcggacccgcaggagcagctgattgccggcaaggcagtcaagggcctcgag
gccgacatcgtccgcacggcgatcctcaaggaaggccgccgcatcgacggccgcgacacc
aagacggtccgcccgatcgaggcgatggtccatttccttccgcgcacgcacggctccgcc
ctgttcacgcgcggcgagacccaggcgatcgtgaccacaacgctgggcaccaaggaagcc
gagcagatgatcgatggcctggaaggtctctcctaccagcgcttcatgctgcactataac
ttcccgccctattcggtcggcgaggtcggacgtttcggcgctccgggccgtcgcgaagtc
ggccacggcaagctcgcatggcgggcaatccacccgatgctgccgagcgttgaggagttc
ccgtacaccatccgcgtcctgtccgacatcacggagagcaacggctcctcgtcgatggcg
acggtctgcggcgcctcgcttgccctgatggacgcgggcgttccgctcaagcgtccggtc
gcgggcatcgccatgggcctgatccttgaaggcaaggacttcgcggtgatcagcgacatc
ctaggtgacgaagaccacctcggcgacatggacttcaaggtcgcgggcacgtcggaaggc
gtcacctcgctccagatggacatcaaggtcgccggcatcaccgaggagattatgaagacc
gctctcgcccaggcgaaggacggccgtgctcacattctcggcgaaatggcgaaggccctc
gatcacacgcgcgaagagctgtcggctcacgcgccgcgcatcgagaccatgtctatcccg
aaggacaagatccgcgaagtcatcggcaccggcggcaaggtcatccgcgaaatcgtcgcg
gagaccggcgccaaggtcgacatcgacgacgacggcacgatcaagatcgcgtcttcggac
ccggccaagatcgaggccgcccgcaactggatccgcggcatcgtcgcggagccggagccg
ggcacgatctacaccggcaaggtcgcgagcctcgtcgacttcggcgcgttcgtcaccttc
atgccgggcaaggacggcctcgtgcacgtctcggaaatcaagaacgagcgtgtcgagaac
gtccgcgacgtcctgaccgaaggccaggaagtgaaggtcaagctgctcgaggtcgaccag
cgcggcaaggttcgcctgtcgatgcgcctcgttgaccaggagactggcgaagagcttccg
gacacccgcccgccgagggagccgcgcgaaggcggcgaccgtggcccgcgcggtgaccgt
ggcgatcgtcatcgtggcggcggacgtgatcgcggcggacgcgacgaccgtggtccccgt
ggcccgcgcggcgaccgtgaccggggcccgcgcgacgaccgcggaccgcggggcgaaggc
cgtggcgaccgcggcccgcgccgggagcgcgaaggcggcgagaacgaaggcaatgcaccc
gagttcgcacccgcgttcctgaccggcggaaacgacgaggactaa
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