KEGG   Sphingomonas sediminicola: H9L14_01205
Entry
H9L14_01205       CDS       T07077                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ssed  Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:ssed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssed03400]
    H9L14_01205
Enzymes [BR:ssed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H9L14_01205
    5.6.2.6  RNA 3'-5' helicase
     H9L14_01205
DNA repair and recombination proteins [BR:ssed03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H9L14_01205
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QNP46864
LinkDB
Position
complement(219551..221971)
AA seq 806 aa
MSNEPDLPLVIRNWFAARGWEPRRHQMDMLRLARAGKNALLVAATGSGKTLAGFLPTIAE
LTEKPTEGLHTLYISPLKALAVDVQRNLLGPIEEMGLPIRVETRTGDTPSDRKARQRIRP
PQILLTTPESLSLLLSYPDSFTIFENLRTIVVDELHGFAKGKRGDLLSLSMARLQKIAPN
LRRVGLSATISDPDAYRSWLAPDADMDEVEIVQGDPGAEPHLSILIPEGKIPWGGHSGRH
AVREIMDLIERHKTTLVFCNTRGLAELIFQDLWSANDKGLPIGIHHGSLAQEARRKVEAA
MAAGKLRGLVATASLDLGIDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDEPSEGVVVP
GNRFEYLEARAALDAIDDGELDPENFRPGTLDVLAQHILGVACAAPFEEHELLAEIRSSA
PYAGLKDETFTEVLNFIATGGYALKAYDRFRRLVPAGDGRWRVARPQIAAQHRMNAGVIV
EQPLLTVRFRNGRRLGTIEEGYASTLAPGDLFFFAGLSLEVEQFKDTDVIVRASSRSGRI
VTYGGQRMSMSTHLANRVRHMLADRNDWHRFPDDVREWLEVQERRSTIPEPEQLLVETFE
HEKLHYMVAYSFEGWNAHQSLGMLITRRMENAGLKPLGFVANDYALACYGLHPITDPKAL
FSPDILEQEFVDWVEQSLLLKTAFREVAVIGGLVERHHPGKKKSGRQVSFSTDLIYDVLR
RYEPGHLLLRAAWDDARARMTELGRLVRLVDRASATMLHVDTGRITPMAIPLMVIIGRES
LPPGAEADATLLIEAEALADEAMRLG
NT seq 2421 nt   +upstreamnt  +downstreamnt
ctgagcaacgaaccggatctcccactcgtcatccggaactggtttgccgcgcgcggatgg
gagccgcggcggcaccagatggacatgctgcggctcgcgcgggcggggaagaacgcgctg
ctggttgcggcgaccggatcgggcaagacgctcgccggattcctgccgacgatcgccgag
ctgactgagaagccgactgaaggtctccatacgctctacatctcgccgctgaaggcgctg
gcagttgatgttcagcgcaatctgctcggcccgatcgaggagatggggcttccgatccgg
gtcgagacgcgcaccggcgacaccccctcagaccgcaaagctcggcagcggatcaggccg
ccgcagatcctgctgacgacgcccgagtccctgagcctgctgctcagctatccggacagc
ttcaccattttcgagaatctcaggacgatcgtcgtcgacgagcttcacggcttcgcgaag
ggcaagcgcggcgacctgctgtcgctgtcgatggcccggcttcagaagatcgcgccgaac
ctccggcgcgtcggtctgtcggcgaccatcagcgatccagacgcataccggagctggctc
gcgcccgatgccgacatggacgaagtcgagatcgtccagggcgatccgggtgccgaaccg
catctttcgattctcatccccgaaggcaaaattccatggggtggacactccggccgccac
gccgtccgcgagatcatggacctgatcgagcgacacaagacgacgctcgtcttctgcaac
acgcgcgggctcgcagagctgatcttccaggatttgtggtcggcgaacgacaagggcctg
ccgatcggaatccaccacggcagcctggcgcaggaggctcgccgcaaggtcgaggcggcg
atggctgcgggaaaactccgcgggctcgtcgcaaccgccagcctcgacctcggcatcgac
tggggcgacgttgacctcgttgtccagatgggcgcgcccaagggttcctctcgccttctt
cagcgcatcgggcgagcgaaccaccgcctcgatgaaccgagcgagggtgtggtcgtccca
ggcaatcgcttcgaatatctcgaagcacgggcggcgctcgacgcgatcgacgatggcgag
ctggacccggagaactttcggccgggaacgctcgatgttcttgcgcagcacatcctcggc
gtcgcctgcgcggccccgttcgaagagcatgagctgctggccgaaatccgctcatccgct
ccctacgcaggcctgaaggatgagaccttcaccgaagtcctgaacttcattgccaccggc
ggatacgcactgaaggcctacgaccgcttccgtcgcctggtcccggcaggcgacggacgc
tggcgcgtcgcaaggccgcagatcgctgcacagcaccgcatgaatgccggcgtgatcgtc
gagcagccgctgctcaccgttcgcttccgcaacggccgaaggctgggcacgatcgaagag
ggttatgcgtccacgctggcgccaggtgacctgttcttcttcgcgggcctcagcctcgag
gtcgagcaattcaaggacacggacgtcatcgtccgcgcctcgtccaggtccgggcgtatc
gtcacctacggcggacagcgcatgtcgatgtcgacgcacctcgccaatcgcgtgcgccac
atgctcgccgatcgcaacgactggcaccgcttccccgatgacgtccgcgaatggctggag
gtgcaggagcgccgctcgacaatcccagagccggagcaactgctcgtcgagacgttcgag
catgagaaattgcactacatggtcgcctacagcttcgagggctggaacgcgcaccagtcg
ctcggcatgctgatcacgaggcggatggagaatgcgggcctgaagcctctcggcttcgtg
gccaacgattacgccctcgcctgctacggcctgcatccgatcaccgacccgaaggcgctt
ttctcacccgacatcctcgagcaggagttcgtcgactgggtcgagcaaagcctcctcctc
aagaccgccttccgtgaggtcgcagtgatcggcgggttggtggaacggcatcatccggga
aagaagaagtcgggccgacaggtcagcttttcgactgacctcatctacgacgtcctccgc
cgctacgagccgggtcacctcctgctccgcgcggcgtgggacgatgcacgcgcgcggatg
accgagctggggcgccttgtccgtctcgtcgaccgggcctccgcgacgatgcttcacgtc
gacaccggccgcatcacccccatggcgatcccgctgatggtcatcatcggccgggagtcc
ctgccacctggggcggaagcggatgccactcttcttatcgaagccgaggcgttagccgac
gaagcgatgcgtcttggttag

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