Sphingomonas sediminicola: H9L14_02125
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Entry
H9L14_02125 CDS
T07077
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssed02000
]
H9L14_02125
Transporters [BR:
ssed02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L14_02125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QNP46089
LinkDB
All DBs
Position
complement(379633..381405)
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AA seq
590 aa
AA seq
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MISSRLALAAALSFLASPAWAETTVAGTDVSATSATSGDSSAATADAPQPGNADDAHHDH
SDDVVVTGVRRKANDVLGGISVLDEADLTREVRPSIGETLARQPGVSATSFGPAASAPVL
RGLSGDRVRVLTDGIGSLDLSSSGPDHAISINPVTAERIEVLRGPSALLFGSSAIGGVVN
VIDARIPRRLPKNAVGVTALASYGTAANERLINGSVDVPLAGKFVVHLDGNWQKSDDLRT
GGHILSKDLREQALASPDPEIQTLADLKGKLPNSAAESKEGAIGLAYVDGGLNIGASITR
HLATYQVPIRYSLVSGVEAEAPTIDQEQTRYDFRAEIPVRGFFSQIRARGGYADYHHDEL
DDTGAIGSSFFSKGGEGRFELIQSERAGWGGTSGLQYLDRNARIEGDEKFLPDSRQRQAG
LFTLQTLVSGPLRVEGGARVEFSKLTADADEQLATPDRSRNFTTWSGSLGGQYEFSPGWR
AGLTLSRSSRAPSIDELFSNGPHGASQSFEVGNPNLNPETSVGVEAVLHRQSGPVTLNAS
LYYNRFSNFIFQAPTGETEGIFPFSNISRAEPIITASRPRRWRSLVKRLA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatctcttctcgactggccctcgcggcagccctctccttccttgcatcccccgcctgg
gccgaaacgacggtcgctgggaccgatgtgtccgcgacgagtgccacgtcgggcgactct
tcggctgcgacggccgacgcgccgcagcccggcaacgccgatgacgcgcatcacgaccac
agcgacgacgtcgtcgtgaccggcgtgcgccgcaaggcgaacgacgtgcttggcggaatc
tcggttctcgacgaggcggacctcactcgcgaagtgcgtccgagcattggcgagaccctt
gctcgccagcccggcgtcagcgcgaccagcttcggcccggccgcgtccgcgcccgttctt
cgcggtctatccggcgaccgcgtccgggttctcacagacggcattggcagcctcgacctg
tcgtcgtccgggccggatcacgccatttccatcaaccccgtcacagcggagcgcatcgag
gtccttcgcggaccctcggccctgctgttcgggtcgtccgcgatcggcggcgtcgtgaac
gtgatcgacgcgcgcattccgcgccgtcttcccaagaatgccgtcggggtgaccgctctc
gcgagctacggcacggcggcgaacgagcgcctcatcaacgggtccgtagacgttcccctc
gccggcaagttcgtcgtccatctcgatggcaattggcagaagagcgatgacctgcggaca
ggcggccatatcctttcgaaggatcttcgcgagcaggctttggccagtcccgatcccgaa
atccagacgctcgccgacctcaagggcaagcttcccaattccgccgccgaatccaaggaa
ggcgccatcggccttgcctatgtcgatggcgggctgaacatcggcgcgtctatcacccgg
cacctcgcgacctaccaggtgccgatccgctattcgctggtctcgggcgtggaagcggaa
gcgccgacgattgaccaggaacagacccgctatgacttccgcgcggagattccggtccgt
ggattcttcagccaaatccgtgctcgcggcggttatgccgactatcatcacgacgagctc
gacgacacgggcgcaatcggctcgagcttcttcagcaagggcggcgagggccgcttcgag
ctgatccagagcgagcgcgcggggtggggcggaacgagcggcttgcagtacctcgaccgc
aacgcacggatcgaaggcgacgagaagttcctgcccgacagcaggcagcgccaggccggg
cttttcaccctgcaaaccctggttagcgggccgctccgggtcgaaggcggcgctcgggtg
gagttcagcaagctcaccgccgacgccgacgagcagctcgcgacgcccgaccgctcacgc
aacttcaccacctggtcgggctcgctgggcggtcagtacgaattctcgcccggctggcgc
gcagggctgaccttgtcgcgaagctcacgcgccccctcgatcgacgaactgttctcgaac
ggcccgcacggcgccagccagtcgttcgaagtcggcaatccgaatctcaatcccgaaact
agcgtcggcgtcgaggccgtgctgcatcgccagtcgggacccgtcacgctgaatgccagc
ctctattacaaccgcttctccaacttcatcttccaggcgcctacgggcgaaacggaaggg
atcttcccgttttccaatatctccagggccgagccaattattacggcttcgaggcccagg
cgctggcgaagtttggtgaagcgtttggcgtaa
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