Sphingomonas sediminicola: H9L14_03815
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Entry
H9L14_03815 CDS
T07077
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssed03400
]
H9L14_03815 (radA)
DNA repair and recombination proteins [BR:
ssed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H9L14_03815 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
AAA_16
RecA
Lon_C
AAA
nSTAND3
AAA_30
GvpD_P-loop
NTPase_1
NACHT
SLFN-g3_helicase
DUF7125
AAA_24
AAA_14
ATPase_2
AAA_5
NPHP3_N
Rad51
CbiA
AAA_19
TniB
DAP3
PAXNEB
CobU
MCM
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QNP46334
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Position
699464..700831
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AA seq
455 aa
AA seq
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MAKPKTRYVCQACGSVTARWQGQCADCAEWNTLVQEAAEVSSIFAAKHNLQGGGRQIQLV
GLDHPVALPERISTGIAEFDRAIGGGIVPGSAMLVGGDPGIGKSTLLLQVCADLASKGRN
VIYVSGEESAEQVRLRAVRLGLGKAPVRLAAATSVRDILTTLGDNGGADLLVIDSIQTMH
SDLIEGAPGTVSQVRASAQELVRFAKEHGTAVVLVGHVTKDGTIAGPRVLEHMVDTVLSF
EGERSHQYRILRAMKNRFGGTDEIGVFAMEREGLTEVPNPSVLFLTQRGEPVSGTSIFPA
LEGSRPVLVEIQALTVRLASGATPRRAAVGWDSGRLAMILAVLEARCGLSFATAEVYLNV
AGGYRLTDPAADLAVAAALISALSERPIPNECIIFGEIALSGEIRQVAHSGLRLKEAAKL
GFEKALVPSGVKGADGIATAHFGNVRALVDQILGR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccgaagacccgttacgtctgccaggcctgcgggtcggtgacggcccgctgg
caaggccagtgcgcggactgcgcggagtggaatacgttggtgcaggaggctgccgaggtc
tccagcatctttgccgccaagcacaacctccagggcggcgggcggcagattcagctggtc
ggcctcgatcatccggtcgcgctgccggagaggatctcgacgggtatcgccgagttcgac
cgtgcgatcggtggcggaatcgttcccggctcggcgatgctggtcggtggcgatccgggc
atcggcaagtcgacgttgcttttgcaggtttgcgccgatctcgcgtcgaagggccggaac
gtcatctatgtctcgggcgaggagtcagctgagcaggttcgcttgcgcgccgtgcggctc
ggcctcggtaaggcgccggtccggctcgcggcggcgacttcggtgcgcgacatcctcacg
accctgggcgacaatggcggtgccgatctgctggtcatcgattccatccagacgatgcac
tcggacctgatcgagggcgcgcccggcacggtcagccaggtccgcgcctccgcccaggag
cttgtccgtttcgcgaaggagcatggcacggccgtcgtgctcgtcggccacgtcaccaag
gacggaaccatcgccggcccgcgcgtgctcgagcatatggtcgacacggtgctcagcttc
gagggcgagcgcagtcatcagtatcgcattctccgcgcgatgaagaaccgcttcgggggt
accgacgagatcggcgtgttcgcgatggagcgggaagggctgaccgaagtcccgaacccg
tcggtcctgttcctcacccaacgcggcgagccggtcagcggcacaagtatctttcctgct
ctcgagggcagccgcccagtgctggtcgaaatccaggccctgactgtccgcctcgccagc
ggtgccacaccgcgccgcgctgcggtcggctgggacagcggcaggctggcgatgatcctc
gccgtgctcgaagcgcgctgcggtctcagtttcgctactgcggaagtttatctcaacgta
gcgggcggttaccgcctgaccgatccggccgccgaccttgccgtcgccgcagcgctcatt
tcggcgctgtccgaacgcccgatccccaacgaatgcatcatcttcggcgagatcgccctt
tctggcgagatccgccaggtcgcgcattccggcctccgcctcaaggaagctgcaaagctc
ggtttcgagaaggcgcttgtcccgtccggagtaaagggcgcagacggcatcgcgaccgcg
cacttcggaaacgttcgagcgttggtggaccagattctgggtcgctga
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