Sphingomonas sediminicola: H9L14_04290
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Entry
H9L14_04290 CDS
T07077
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssed03000
]
H9L14_04290
Transcription factors [BR:
ssed03000
]
Prokaryotic type
Helix-turn-helix
LysR family
H9L14_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_28
HTH_24
HTH_30
MarR_2
HTH_5
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QNP46410
LinkDB
All DBs
Position
784362..785300
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AA seq
312 aa
AA seq
DB search
MRRLPPLAAVRAFEAAARNESFTAAAAELGLTQAAVSYQVKALEERLGAPLFVRERGRAR
LTPLGHRLLPTLSQAFDSIEAAFTTQREEDESLLTITTTHTFANTWLAWRLGAFQMAHPE
LAVRMSTSNDIVDLKAGDADIAIRAGPGHWPGLETHKLFESQFTPMASPECLAAEERKLG
RKLQPSDMPTAHIINPGDDWWQQWFCDNGVAPDEKALRRPGIRLDNQANEGHAAMAGQGF
ALLTPFLWQGDVAAGRLVVPFPESISARGWAYWLVLPPERRMVPKVKRFREWLLAVMEEA
RQPALSDAAMEI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcctgccacccctcgctgccgttcgggcctttgaagccgcagcccgcaatgag
agcttcaccgctgctgcggccgagctcgggctgacgcaagccgccgtctcgtatcaggtt
aaagcattggaagagcggctcggtgctccactgttcgtgcgagaacgtggacgcgcccgg
ctcaccccgctgggccaccggcttcttccgacgctaagccaggccttcgactctatcgag
gcggctttcacgacccagcgcgaggaggacgaaagcctactgacgatcacgaccacccat
acgtttgcgaacacctggctggcgtggcggctcggcgcattccagatggctcacccggag
cttgccgttcgcatgtcgaccagcaacgacatcgtcgacctgaaagccggcgacgcagat
atcgctatacgtgcaggccccggtcactggccgggtctcgagacccataagcttttcgag
tcccagttcacgccgatggcgagcccggagtgcctggccgccgaagagcgcaagttgggc
cggaagctgcagccgtcggacatgccgaccgcgcacatcatcaatccgggcgacgactgg
tggcagcaatggttctgcgacaatggcgttgctcccgacgagaaagcccttaggcgtccc
ggcattcgcctcgacaaccaggcgaacgaaggtcatgcggcgatggcggggcagggcttc
gcgctgctgacaccgttcctgtggcaaggcgacgtcgcggccgggcgtctggtggtcccg
ttcccggagagcatttcggcgcgcggttgggcctattggctggtgctccctccggagcgg
cgcatggtgcccaaggtgaagcggttccgtgaatggctgctcgcggtcatggaagaggcg
aggcaacccgctctttcagacgcggcgatggagatctga
DBGET
integrated database retrieval system
