Sphingomonas sediminicola: H9L14_04685
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Entry
H9L14_04685 CDS
T07077
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssed03009
]
H9L14_04685
Enzymes [BR:
ssed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
H9L14_04685
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
H9L14_04685
Ribosome biogenesis [BR:
ssed03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H9L14_04685
23S rRNA modification factors
H9L14_04685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
TspO_MBR
Methyltransf_12
Methyltransf_11
Methyltransf_25
S4
Methyltransf_23
DUF2070
Motif
Other DBs
NCBI-ProteinID:
QNP46462
LinkDB
All DBs
Position
855375..856586
Genome browser
AA seq
403 aa
AA seq
DB search
MLVSRGLADSRTKAQALIMAGAVFSGERKLAKPGDMLAEDAPLEVRGKDHPWVSRGGIKL
DHGLAHFCLDVSGAVALDVGSSTGGFTDVLLSRGAAKVYAIDVGTNQLAWKLRQDPRVVV
HEQTNARFLTADQVPEPIDIVVCDASFIALAKVLEAPLKLVGPGAKLVALVKPQFEAGRE
DVGKGGVVRDPEVHERVCAQAKGWVESQGWTVLGVTPSPITGPEGNIEFLLGRRRMAEAV
ERREWWKIALVTVPAIIIAGSASGWLSNSGFGNPWFDSLAKPFFMPPGWAFGVVWPILYA
LLGIALALILVEPPSDRRRNALLAFFAQLALNFAWSPIFFAAHAIQIALGVIVVMAALAA
FTAGQFRRIRPLAGYLMVPYLLWLCFAATLNSAIGRLNPGASV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttgttggtgagccgcgggctcgccgacagccgtaccaaggctcaggcgctgatcatggct
ggagcggtgtttagtggggagaggaagctcgccaagccgggcgatatgctcgccgaggac
gcgccgctggaagtgcgcggtaaagaccatccttgggtctcacgcggaggtatcaagctc
gatcacgggctggcgcacttctgcctcgacgtgagcggcgcggtggcgctcgatgtcggg
tcgtcgactggtggctttacggacgtcctgctgtcgcgcggtgcggccaaggtctacgcg
atcgacgtcggcactaatcagctggcgtggaagcttcggcaggacccgcgggttgtcgtc
cacgagcagaccaatgcgcgcttcctgaccgccgaccaggttccggagccgatcgacatc
gtcgtctgcgacgctagcttcattgcgctggcgaaggtcctcgaagcgccgctcaagctt
gtcgggccgggtgccaagttggtcgctctggtgaaacctcagttcgaagcaggtcgagaa
gatgtcggaaaaggtggtgtagttcgtgacccggaagtccacgagcgcgtttgtgcacag
gccaaaggctgggttgagtcccaaggctggaccgtgcttggcgtgacaccaagcccgatc
accgggcccgaaggcaatattgagttcctgctggggcggagaagaatggctgaagctgtc
gagcgtcgagaatggtggaagatcgcacttgtcacggttccggcgatcataattgccggg
tccgccagcggctggctatccaattccggtttcgggaatccctggttcgacagcctcgca
aagccgttcttcatgccgcccggctgggcgttcggcgtggtgtggccgatcctctacgca
ctgctcgggatcgcgcttgccctgatcctggtcgaaccgccgtcggaccgccgccgcaac
gcactgttggcctttttcgcgcagttggcgctcaatttcgcctggtcgccgattttcttc
gcggcacacgcgatccagatcgcacttggcgtaattgtcgtgatggcagcgctcgccgct
ttcaccgcgggccagttccgccggatccggccgctcgctggttacctgatggtgccgtac
ctgctttggctctgcttcgcggcgacgctcaattccgcaatcggccggctcaatccaggc
gctagcgtttag
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integrated database retrieval system
