Sphingomonas sediminicola: H9L14_05915
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Entry
H9L14_05915 CDS
T07077
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssed03032
]
H9L14_05915
03036 Chromosome and associated proteins [BR:
ssed03036
]
H9L14_05915
03400 DNA repair and recombination proteins [BR:
ssed03400
]
H9L14_05915
DNA replication proteins [BR:
ssed03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H9L14_05915
Chromosome and associated proteins [BR:
ssed03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H9L14_05915
DNA repair and recombination proteins [BR:
ssed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H9L14_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QNP46637
LinkDB
All DBs
Position
1098181..1098453
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQELIGHVADRAGLSRNDAARAVETMLEVVTSALKRGDEVRLVGFGNFSVTRRKASTG
RNPRTGEPMQIKASAQPKFRPGKVLKDAVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggaactgatcggacatgtcgctgatcgcgcaggtctcagcaggaacgac
gccgctcgtgccgtggagacgatgctcgaagttgtgacgtccgcgctgaagcgcggcgac
gaagttcggctcgtaggattcggcaatttctcggtcactcgccgcaaggcgtccaccggg
cgcaatccacgcactggggagccgatgcagatcaaggccagcgcccagcccaagttccgt
ccgggcaaggtcttgaaggatgctgttcagtaa
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