Sphingomonas sediminicola: H9L14_06140
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Entry
H9L14_06140 CDS
T07077
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssed03029
]
H9L14_06140 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssed02000
]
H9L14_06140 (bamA)
Mitochondrial biogenesis [BR:
ssed03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
H9L14_06140 (bamA)
Transporters [BR:
ssed02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L14_06140 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
QNP46665
LinkDB
All DBs
Position
1139350..1142070
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AA seq
906 aa
AA seq
DB search
MTSERKFIGNRAGAVFLAGTILGGWSVPVLAQAQQSDPLAAQPAPAPAQNPPATPAPAPT
PVSVAPAPATQGTIRSIAVRGNQRLEPETIRSYANLSPGQSYSAETLDTALKDLYGTELF
SDVVITGAETGNIVITVQENPVINRIVLEGNKRIKSDKILPEIKLKAREIFTRSKARADV
ERIIELYKRQGRFAARVEPKVVNLEQNRVDLVFEIYEGDKSKVRSINIIGNDAFDDGRLR
KEMYTRQAGGVLGFLKSNDSYDPDRLAADQQKLRAFYLTEGYADFRVVSALAELTPDRRD
FVITYVVEEGPRYRFGKIEAESALRDLQPDKIVQTVNLKEGDWFNAKAVEDAVTKLNEEA
GGLGYAFADINPAYNRDAEKHVMGITFRVGDTPRTYVERIDIQGNTSTRDKVIRREFRVN
EGDAFNALKVKRSQDRLQSLGFFQENLEIKQTEGSSPDRVVLGLNVEEKSTGELQLSAGY
SSLERFILAFSIAQRNFMGKGQELNAGVNWSRYSKSIQLGFVEPYLFDKQILLGGDIFRR
DYNSFNFVGNQRNTTYSQTSTGTALRLGFPITEYITLGTRYSLILDNITLDKGTFFTDPD
LVADPDGSGPLTGSNGPLPAACDPKKAGQYLCDELGRRLTSSVGYSIVYNDTNGIRPTRG
QSLVVSQDFAGLGGDVRYVRSRFSGIKYWQPPFLGSGWVFSARAEGGYIHPLEKAPGPGR
DAIRITDRFFGTQLRGFDIRGIGPRILREDYDENGEFVSASNRVSDALGGRAYYMGRVEL
EFPTSSALKSFGLRPSAFVDVGSVWGLKSPALQDIPGFCSPPSGTTGSVVTLDPGQTKAN
CASGYTFTSGYRERFVGNSPKPRLAIGVGVNWVSPFGPLRIDLAKAILKQEGDDTKLFSF
NVGTQF
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcagagcgtaagtttattggcaatcgcgcaggcgcggtcttcctcgccggaacc
atcctgggcggctggtcggtacccgtattggcgcaggcgcagcagtcggatccgctcgcg
gcgcagcccgctccggcaccggcgcagaatccgcccgcgacaccggcacctgcaccaact
ccggtgtccgttgctcctgcaccggcaacgcagggaacgatccgttccatcgcggttcgc
ggcaaccaacgcctggagccggagacgatccgctcctacgcaaatctttcgcccggtcag
agctattccgccgagacgctcgatacggcgctcaaggacctttacgggactgagctattc
tccgacgtcgtcatcaccggcgccgagactggcaacatcgtgatcaccgtccaggaaaac
ccggtcatcaaccggatcgttctggagggcaacaagaggatcaagagcgacaagatcctc
cccgaaatcaagctgaaggctcgcgagatcttcacgcgctccaaggcccgggcagacgtc
gagcgcatcatcgagctttacaagcgccaaggccgcttcgccgcccgcgtcgagccgaag
gtggtcaatctcgaacagaaccgcgtcgacctggtgttcgagatctatgagggcgacaag
tccaaggtccgcagcatcaacatcatcggcaacgatgcgttcgacgacgggcggctccgc
aaggagatgtacacgcgccaggccggcggcgtcctgggcttcctcaagtccaatgacagc
tacgatcccgaccgtcttgcggccgaccagcagaagcttcgcgccttctatctgaccgaa
ggctacgcggatttccgcgtcgtctcggcgctggccgagctaaccccggaccgccgcgac
ttcgtcatcacctacgtggtcgaagagggcccgcgctatcgtttcggcaagatcgaagcc
gaaagcgcgcttcgcgaccttcagcccgacaagatcgtccagacggtcaacctcaaagaa
ggcgactggttcaacgccaaggcggtcgaggatgccgtcaccaagctgaatgaggaagcc
ggcggcctcggttatgcctttgccgacatcaatccggcctataatcgcgatgccgaaaag
cacgtgatgggtattactttccgggttggcgatacgcctcgcacttacgtcgagcgcatc
gatatccagggcaacacctcaacgcgcgacaaggtcatccgccgcgagttccgcgtcaac
gagggcgacgccttcaacgccttgaaggtgaagcgttcgcaggatcgcctgcagtcgctc
ggcttcttccaggagaacctggagatcaagcagacggaaggctccagtccggaccgggtc
gttctcggcctcaacgttgaagagaagtcgacgggcgagctccagctatccgccggctat
tcgagcctcgagagattcatcctggcattctcgatcgctcagcggaacttcatgggcaaa
ggccaggagctcaacgcgggcgtgaactggtcgcgctattcgaagtcgatccagcttggc
ttcgtcgaaccctatctgttcgacaagcagatcctgctcggcggcgacatctttcggcgc
gactacaacagcttcaatttcgtcggaaatcagcggaacacgacctattcgcagacgagc
acgggcaccgcgctccgcctcggattcccgattaccgaatatattacgttgggcacgcgc
tactcgctcatcctcgacaatatcaccctcgataagggcaccttcttcaccgatccggac
cttgttgcagatccggatggaagcgggcctctcactggaagtaatggcccgctgccggcg
gcgtgcgaccccaagaaggcgggtcagtatctatgcgacgagctcgggaggcgcctgacg
tcgtcggtcggctattcgatcgtctataacgatacgaacggcatccgcccgacgcgcggc
cagtcactcgtcgtttcacaggacttcgcgggcctcggcggtgacgttcgctacgtgcgg
tcgcgcttcagcggcatcaaatattggcagccgccattccttggcagcggctgggtcttc
tcggctcgtgcagagggcgggtatatccatccgctcgagaaggcgccgggaccgggccgc
gacgcgatccgcatcaccgaccgctttttcggaacccagcttcgcggtttcgacatccgc
ggcatcggcccgcgtatcctgcgtgaggactacgacgagaacggcgagttcgtatctgcc
agcaatcgtgttagcgatgcgctcggcgggcgagcctattatatgggccgcgtcgaacta
gaattcccgaccagttccgcgttgaagagcttcggactccgaccttccgcatttgtcgac
gtcggctcggtctggggactcaagagtccggcgctgcaggatattccgggcttctgctcg
ccgccgagcggaacgacaggatcggtggtaacgctcgatccgggtcagacgaaggcgaat
tgcgcttcgggctatacgttcacgtcgggatatcgcgaacgtttcgtcggcaattcgccg
aagccgcgcctggccataggtgtaggcgtcaactgggtttcgcctttcgggccgctcagg
atcgacctcgcgaaggcgatcctcaagcaggaaggcgacgacacaaaactcttcagcttc
aacgtaggaacacaattctaa
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