Sphingomonas sediminicola: H9L14_06455
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Entry
H9L14_06455 CDS
T07077
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssed
Sphingomonas sediminicola
Pathway
ssed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L14_06455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssed03400
]
H9L14_06455
Enzymes [BR:
ssed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H9L14_06455
DNA repair and recombination proteins [BR:
ssed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L14_06455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QNP46709
LinkDB
All DBs
Position
1198904..1199587
Genome browser
AA seq
227 aa
AA seq
DB search
MGGEHDRLTAAEAASVIGWWIEAGVDVAIQEQPRAWLGATAAVTSVETHTLGAPEPTPEL
PASLEAFRHWLGETPSLPLAKANARRALPIGIEAAEVMLLADMPTPEDVAEGQPIAGPAW
ELTQRMLAAIGFDSNQAYVSGLTCFHSPGTRLSGNDLEACATLARRHVALAKPKRLLLLG
MHHAGHCSESRSQSPAVMFTKLKGACGSNLPSAVPARSTVEQGAGVA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggagcacgaccgcttgactgcggccgaggctgccagcgtcattggctggtgg
atcgaggcgggagtcgatgttgcgatacaggagcaaccgcgcgcctggctcggcgcgacc
gcggccgtgacttctgtcgagacccacacgctcggcgctcccgagccaaccccggaactt
cctgcaagtctcgaggcatttcgacactggctcggtgagacgccttctcttccgttggca
aaggccaatgctcgtcgtgctcttccgataggaattgaagcggccgaggtgatgcttctt
gccgatatgcctacgcccgaggatgttgccgaaggacaacccatcgcggggccggcttgg
gaactcacccagcgcatgcttgcagcgatcggcttcgatagcaaccaggcctatgtctcg
ggcctgacctgcttccatagcccgggcacccgcctttccggcaacgatcttgaagcctgc
gcgacacttgcgcgaaggcacgtcgccctcgccaagccgaagcgactgctgcttctgggg
atgcaccatgccgggcactgctcggaaagccgctcacagtcgcccgcggtcatgttcaca
aagttgaagggtgcgtgcggtagcaaccttccatccgcggttcctgctcgatcgaccgtc
gaacaaggcgctggcgtggcgtga
DBGET
integrated database retrieval system
