Sphingomonas sediminicola: H9L14_06780
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Entry
H9L14_06780 CDS
T07077
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssed03400
]
H9L14_06780 (addA)
Enzymes [BR:
ssed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L14_06780 (addA)
DNA repair and recombination proteins [BR:
ssed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H9L14_06780 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QNP46754
LinkDB
All DBs
Position
complement(1267893..1271306)
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AA seq
1137 aa
AA seq
DB search
MGKRFKPLPILEGAQAAAVDPNVHASVSASAGSGKTQVLTGRVLSLLMNGADPESILCLT
FTKAGAAEMANRIGARLAAWVRLSDAQLRKELYALRGPNDPAALQRARRLFAKVLEAPGG
LRIQTIHSFAQTLLSAFPAEAGITPGFKPIEGRAEQELAKTTLAGLLADAESRRDEQLIA
DVQCLSLRLGEEGAVKYLMLCAQSPDAMAALGSPEKIEPALRHLMDLPDSSVEDFLANHC
HEDRFDCDLLEAIADANRRWGAQSGLTYAQAIEDWLELTPIERAAGLQKLRKVVLTDKGT
PRVSTGQTKVEPAYEDHAGRLATLIGDLLAVQNGVRLTGEMAAGLRAGQAFAAIYTKAKR
SAGVADFNDLIAWTRRLLDRPGMGEWVRYKLDRRTDHILVDESQDTNREQWEIVQALAAE
FFAGVGAVESRGRTIFMVGDFKQAIFGFQGTDPQEFKRARDWVRQQSAALLEADEDARAG
AALEFRDLSIEASYRSAPAVLDVVDAVIGDVGYRNMGLPDHPNLHRAHFHARPGVVELWK
PFAVENVEDSEDGEEGWLGEEARLYASALARQVRRWIEEAPILASTKRPLSAGDVLILVR
SRGELASLIVARLFEEGVPVAGIDRLHLQEPLAVKDLLAAVAFAAQPLDDLNLANLLVSP
LMGWSQELLLELAYGRGGISLWQRLGERADLKPEFRTARDQLGELLATADFTTPHRFLET
ILSGPMDGRRKLYGRLGMAARDPIDELLASALDFEHQEIASLDRFLAWFSRGEVEIKRDP
SAPANAVRVMTVHGAKGLEAPVVILADATADPAKLGGTSRTLDFPVAGAGEVPLIRPRKA
ERVSPFSELIVEEEARDLEEHWRLLYVGLTRAEERLVIAGLQPKTKDGIRPENSWHTSVE
RALVSLGAHWIEDEHWGSALRYQGGVPAGAVKAKSVSAALARPSIPAWATTRVPPEARPP
QPLAPSAIAEDRESLPPPSESMRLAAERGTMIHLLLERLADVERLQRHAAALRWLERSAG
MTDAGARGEIADTVCEVLSDPRFSALFGERSLAEAPIAATIADGTVVAGTVDRLLVEEHR
ISVVDFKTGKVPQSHDAIPASHKAQMSAYTAALRVIFPGREVRAALLYTSGPQLFEL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgcttcaagcctcttccaattctcgagggagcgcaggccgcggcggtcgat
ccgaacgtccatgcctcggtgtcggcatcggcaggctcgggtaagacgcaggtcctgacc
ggtcgagtgctcagcctgctcatgaacggggccgatccagaatcgatcctttgcctgacc
ttcacgaaggcaggtgcggcggagatggcgaaccgcatcggtgcgcgtctggcggcctgg
gtacgcttgtcggatgctcagcttcgcaaggaactctacgctctgcgcggcccgaacgat
ccggccgcgcttcagcgagcgcggcgtctgttcgccaaggttttggaggctccgggcggc
ctgcgcatccagacgatccatagctttgcccagacgcttctatccgcattcccggcagaa
gcgggaataacgcccggcttcaagccgatcgagggccgtgcggagcaagagttggcgaag
acaaccttggctggcttgcttgccgacgccgaatctcgccgcgacgagcagctaattgcc
gacgtccagtgcctcagcctccgtctaggcgaggaaggggccgtcaaatatttgatgctc
tgcgcccaatcgccggacgcgatggccgcgctcggatcaccggagaaaatcgaacccgcg
cttcggcatctgatggacctgccagacagctcggttgaggactttcttgctaaccattgc
catgaggatcgcttcgattgcgaccttctcgaagcaattgccgatgccaaccgcaggtgg
ggcgcgcaaagcggcctcacctatgcccaagccatcgaagactggctcgaactgacgccg
atcgagcgggcggcaggactgcagaaacttcgcaaagtcgtcctcacggacaagggtacc
ccacgtgtctcgacgggccagacgaaagtggagccggcctatgaggatcatgcgggccgc
ctcgcgaccctgatcggcgatttgctcgcggtgcagaatggcgttcgattgactggcgaa
atggcggcgggactgcgggccgggcaggcgtttgcggctatttacacgaaggcgaagcga
agcgccggagttgcggatttcaacgacctgatcgcttggacgcggcggctgctcgacagg
ccggggatgggcgagtgggttcgctacaagctcgaccggcgaaccgatcacatccttgtc
gacgagtcccaggacacgaaccgcgaacagtgggagatcgttcaggcgcttgctgccgag
ttcttcgccggagtgggagcggtcgagagccgtggtcggaccatattcatggtcggcgac
ttcaagcaggcgattttcggcttccaaggtacggacccccaggagttcaagcgcgctcgc
gattgggttcggcagcagtccgcggcactgctggaggccgacgaagatgcgcgggccggc
gcggcgctggaatttcgcgatctttccatcgaggcgagctatcggtcagcaccagctgtt
ctcgacgttgtggacgccgtcatcggtgatgttggctaccgaaacatgggccttcccgat
cacccgaaccttcaccgcgcccattttcatgcgcgtcccggtgtcgtcgaactttggaag
ccattcgcggttgagaacgtcgaggacagtgaggacggggaggaaggctggctcggcgag
gaggcccgcctgtatgccagcgcgttggccaggcaagtgcggcgctggatcgaagaggcg
ccgatccttgcctctacgaaacgaccgctgagcgccggcgatgtgctcattctagtccga
agccgcggcgaactggcttcgctgatcgtcgcgcgccttttcgaagaaggtgtgcccgta
gcgggtatagaccgcctgcatctccaggagccgctggccgtcaaggatctgctcgcagcc
gtcgccttcgctgcacagccgctggacgacctgaacctcgcgaacctgctggtttctccc
ctgatgggctggagccaggagcttttgctcgagctcgcctacggacggggaggcatatcg
ctgtggcagaggctcggcgaacgcgccgacctgaaacctgaattccggacggcccgggac
cagctcggcgaactccttgcgacggccgactttacgacgccccaccgctttctggagacc
atcctctccggaccaatggacggacggcgcaagctctatggtcgcctcggtatggctgct
cgcgaccccatcgacgagctgctggcaagcgccctcgatttcgagcatcaggaaatagcg
tcgctcgaccggttcctggcgtggttttcgcgcggcgaggtcgaaatcaaacgcgaccct
tccgctccggcgaatgcggttcgagtaatgaccgtgcacggcgccaagggcttggaagcc
cccgtcgtaatcctcgccgacgctaccgccgacccggcaaagcttggtggcacatcgagg
acgctcgatttccccgttgccggagcgggcgaagtgccgctcattcggccccgcaaagcg
gaacgcgtttcgcccttctccgaactgatcgtcgaagaggaagcgcgggatctcgaggag
cattggcggctactttatgttgggctgacccgcgccgaggagcggctcgtgatcgctggc
ctgcagccgaagacaaaggacggaatccgtcccgagaactcctggcatacgagcgtcgag
cgggcacttgtgtcgctaggcgcccactggatcgaggacgagcattgggggtctgcactt
cgttaccaggggggagtcccggcaggcgcagtgaaggcgaagtctgtgtcggccgcgctc
gctcgcccgagcattccggcgtgggcgacgacacgcgtgcctcctgaagcgcgtcccccg
cagccgctcgctccttcggcaattgccgaggatcgcgagtcactgccgcctccgagcgag
tccatgcgcctcgcggccgagcgcggtacgatgatacacctgcttctggaacggctcgcg
gacgtagaacgattacagcgtcacgctgccgcactacgatggctggagcgaagcgcaggg
atgacggatgcaggtgcccgcggcgaaatcgcggatactgtctgcgaagtcctgtcggat
ccgcgcttttcagctctgtttggcgaaagatctctcgcggaagctccaatagcggcaacc
atcgctgacgggacggtcgtcgcggggaccgtcgatcgtctgttggtcgaagaacaccgg
atttcggttgtcgacttcaagaccggcaaggtgccgcaatcgcacgatgcgattccagcc
tcccacaaggctcagatgagcgcctatacagcggcgttgcgagtcatttttccgggtcgg
gaggtacgcgccgccttgctctacacgagcggtccccagctcttcgaactgtag
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integrated database retrieval system
