Sphingomonas sediminicola: H9L14_06810
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Entry
H9L14_06810 CDS
T07077
Name
(GenBank) PAS-domain containing protein
Organism
ssed
Sphingomonas sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_7
HisKA
PAS_4
HATPase_c_2
HATPase_c_3
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
QNP46758
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Position
complement(1276597..1278954)
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AA seq
785 aa
AA seq
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MGELGGSAWLALVIAGLWLAIAAALLVLAVRRMREAGAVIDAATSMAALLDVAPARPLLV
RPDGSLEADQRLLRELGLERSVTRWADLGGDDQGLIDEDLAALKSAVDASALSGTSIQRQ
VRASGSDRVFDVRGGPAPAHEPAGTILLWFSDTSAAEAERSKLSLRIRQTEAAFDSLTHL
IEAAPFPMWYRGPDLRLGLVNRAFVEAVEARDASDVISRSIELVDASGQDSARASAEAAL
ESGRLQTRIQPATIRGERRVMRIVNVPLTTGAVAGFAIDIQELEDARSELSRHVQSQRDL
ADRMTAGTVQFDADRNVSFFNQPFAVMAQLDPEWLAEAPEFDRVLERMRERNRLPEVRDF
PVWKAEKREWFTSPQEVIEEDWILADGDHLRMVAQPLPDGGLRMFLEDRTEQVRLASARD
TLLRVRAATFDNLFEAISVFASDGRLYLWNKRFRDVWDLEEERLTEHPRVDELVPAMARK
LVNPTAAAQIREMVRHTTNERQPASGHISLTDGRHFEFAAVPLPDGNALFTMVDVTDSTR
IQEALRERATALEQADRVKTDFVANVSYELRTPLTSIGGFAEMLAGGYAGKLAPAAADYV
SAILEAVDRLSKLIDDVLALTQGTASGIALERERVDLSGLCRMAVDTVQPRAIEKDQKLE
VDIAPSTGFAFGDVRRLRESIEHVLTNAIAYTDKKGRIRIEASGDDEQAVIRIVDNGIGI
SKQDLPRVFERFDRINETGVRGEAALGLGLPLTRQFIEAHSGHVELESKKGKGTTVTLTI
PRGSK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagctggggggctcagcatggctggcattggtgattgcgggtctttggctcgcg
atcgcagccgctttgctcgtgcttgccgtgcgccgaatgcgggaagctggggcagtcatt
gacgctgccacgtcgatggcggctcttctcgacgttgcgccagcgcgaccgcttctcgtt
cgaccggacggatcgctcgaagcggatcaacgcctcctgagagaactcgggttggagcgc
tccgttacgcgatgggctgatcttggcggcgacgatcaaggactgatcgacgaggacttg
gccgcgctgaagtctgcagtggacgcttcggccctctcaggaacgtcgatacagcgccag
gtgagggcctccggatcggaccgcgtgttcgatgtgcgtggcggtcctgctccggcccat
gagcccgcgggcaccatccttctctggttctccgataccagcgcagcggaggcggaacgg
tcgaagttgtcacttcgcatccggcagaccgaagcagcgttcgattcgctcactcacctg
atcgaggccgccccatttccaatgtggtaccgcggccccgatttacggctcggccttgtc
aatcgcgcctttgtcgaggctgtggaagcacgcgatgcctcggacgtcatttcccggtcg
atcgagctggtcgatgcaagcggacaggatagcgcgcgggcttcggcggaggcggcgctc
gaatccggcaggctccagacacgcatccagcctgcaacaattcgtggcgagcggcgcgtg
atgcgcattgtgaacgtgccgctgacgacaggcgcggtcgccggcttcgcgatcgatatc
caggaattggaagacgcccgctcggagctatcccgccacgtgcaatctcagcgtgacctg
gccgaccgcatgaccgcgggcacggtccagttcgacgccgatcgcaatgtcagtttcttc
aaccagccttttgcagtcatggcgcagcttgatccggaatggcttgcggaagcgcccgaa
tttgatcgcgtcctggagcggatgcgggagcgcaaccgccttccggaggtccgcgacttt
cccgtgtggaaggccgagaaacgcgagtggttcaccagtcctcaggaggtcatcgaggag
gactggattctcgccgacggcgatcacctgagaatggtcgctcagccgcttcccgacggc
ggccttcgcatgttcctggaggaccgcacagagcaggttaggcttgcgtccgcgcgcgat
accttgttgcgggttcgcgctgcgacattcgacaatttgttcgaggccatcagcgtcttc
gctagcgacggccgtctctacctatggaacaagaggttccgcgacgtctgggatcttgag
gaagaacggctgaccgaacacccgcgtgtcgacgagctggtgccggcgatggctcggaaa
ctcgtcaatccgaccgctgccgcccagattcgcgagatggtgcggcacacgacgaatgag
cgccagcccgcgagtggccacatttcgctgacggacggcaggcatttcgaattcgcggcg
gtaccgctgccagacggaaatgcgctcttcacgatggtcgatgtgacggactcgacgcgc
attcaggaggcgctgcgcgaacgcgcgaccgcgctagagcaagccgatcgggtaaagacc
gacttcgtcgctaatgtcagttatgagctgcggacccctctgacttcgatcggcggattc
gccgagatgctggctggtggttatgcgggcaagctggctccggcggcagccgattacgtg
agtgccatcctcgaagcggtggaccgcctttcgaagctgatcgacgacgtcctcgcgcta
actcagggaacggcgagcgggatcgctttggagcgcgagcgagtggacctgtcgggattg
tgccggatggcggtcgacacggtccagccgagagcgatcgaaaaggaccaaaagctggaa
gtcgacattgcgcccagcacggggtttgcgttcggtgacgtccgacgcctcagggaatcg
atcgagcacgtgcttacgaatgccatcgcttacaccgacaagaagggtcgcattcggatt
gaagcatcgggcgatgacgaacaggccgtgatccggatcgtcgacaacggtatcggtatc
tccaagcaggacctgccgcgtgtcttcgaacgttttgaccggatcaacgagactggtgtc
cgcggcgaggctgcgcttggccttggccttccactgacgcggcagttcatcgaggcacac
agtggtcatgtcgagctggaatcgaagaaggggaaggggacgaccgtgaccctgaccatc
ccgcgcggaagcaaatga
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