Sphingomonas sediminicola: H9L14_07125
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Entry
H9L14_07125 CDS
T07077
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssed03021
]
H9L14_07125 (rpoH)
Transcription machinery [BR:
ssed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9L14_07125 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_19
NirdL-like_HTH
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QNP46804
LinkDB
All DBs
Position
1329699..1330601
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AA seq
300 aa
AA seq
DB search
MAQRNVVSIPASGGEAGLNRYLSEIKKFPILAPEEEYMLAKRWREHGDTDAAAKLVNSHL
RLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEFIL
RSWSLVKMGTTAAQKKLFFNLRRMKNQIEAFEEGDLKPADVAKIAKDLGVTEDEVISMNR
RMGMGGDTSLNAPLRDTEGEGQWQDFLVDTGPLQDELIAEDEESRVRHDLLMDALETLND
REKHILTERRLTDEPKTLEELSQVYNVSRERIRQIEVRAFEKLQSALIRLAGEKRLLPAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaagaaatgtcgtctcgatccccgccagtggcggggaggcagggctcaatcgc
tatctgtccgagatcaagaaattcccgatcctcgctccagaggaagagtatatgctcgcc
aagcgctggcgtgagcatggggatacggacgcggccgcgaagctcgtcaattcgcacctc
cgcctcgtggcgaagatcgccatgggttaccggggctacggcctgccggtcagcgagctg
atctccgaaggcaatatcggcctgatgcaaggcgtgaagaagttcgagcccgatcggggc
ttccgcctcgccacctacgcgatgtggtggatccgcgcgtcgatccaggaattcatcctg
cgctcgtggagcctcgtgaagatgggcaccaccgcggcgcaaaagaagctcttcttcaac
cttcgccggatgaagaaccagatcgaggcgttcgaggagggcgacctcaaacctgccgac
gtcgccaagatcgccaaggacctcggcgtcaccgaggacgaagtgatctcgatgaaccgc
cgcatgggaatgggtggcgacaccagcctcaatgccccgctgcgcgacaccgagggcgaa
ggccagtggcaggacttccttgtcgacaccggcccgctccaggacgaactgatcgcggag
gacgaggaaagccgcgtccgccatgacctgctcatggatgcgctcgagacgctgaacgat
cgtgagaagcatatcctcaccgaacggcgcctgaccgacgagccgaagacgctcgaggag
ctcagccaggtctacaacgtcagtcgcgagcgtatccggcagatcgaagtccgagcgttc
gagaaactgcagtcggcgctgatccggctggcgggtgaaaaacggctgcttccggccgcc
taa
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