Sphingomonas sediminicola: H9L14_07815
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Entry
H9L14_07815 CDS
T07077
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ssed
Sphingomonas sediminicola
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssed03000
]
H9L14_07815
Transcription factors [BR:
ssed03000
]
Prokaryotic type
Helix-turn-helix
LacI family
H9L14_07815
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
MarR_2
HTH_3
HTH_10
Sigma54_DBD
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QNP46961
LinkDB
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Position
complement(1456732..1457799)
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AA seq
355 aa
AA seq
DB search
MQRNPGARPRPVTIKDVAAEADVSLQTVSRVINDGPNVRPAIKERVLKAIEKLGYVPSLA
ARRMAGKKSYLLLALNDRDRTIEDWRSGDGTDWVDQMLLGGMLKCAEHGYRMIFELVDTH
SSNVERELTSALGALHPDGVILTPPHGDNPTITNLLNERRIPFARIGSTRKGAGFGIAMD
DATAAAAATAELARLGHRRIGFITGSLEYALSTDRREGYQRAVRAAGIEDDPRLIAQGDF
TFESGEAATRELLSLPNPPTAILASSGHMSLAALEVAKSMGFRVPDDLSIISFDDTPIVK
FSAPPLTAIRQPIAEMTARAAELLIKVNIGEPGPTKTQIVPFSLIVRSSTGPLKG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atccaacgaaatccaggcgcgcgtccgcgtcccgtcacgatcaaggacgtggcggccgag
gcggacgtgtcgcttcaaactgtgtcgcgtgtcatcaacgacggtccgaatgtccggccg
gcgatcaaggaacgcgttctcaaggcgatcgagaagctcggatatgtgccgagcctcgcc
gctcgacgcatggcggggaagaagtcgtaccttctgctggcgctgaacgaccgcgaccgt
acaatcgaggactggcggtctggcgatggcacagactgggtcgatcagatgctgcttggc
ggaatgcttaaatgcgcggagcatggctatcggatgatcttcgagctggtcgacacgcac
agctcgaacgtcgagcgcgaactgacctcggccctgggggcgctacatcccgacggggtc
atcttgacgccgccgcacggcgacaatccgaccatcaccaatctgctcaacgaacgccga
attccgttcgcgcggatcggttcgaccagaaaaggcgcgggtttcggaattgcgatggat
gatgcaacggccgccgctgctgcgaccgcggagctcgcccgtctcggtcatcgccgaatt
ggcttcatcaccggcagcctcgaatatgcgctgagcaccgatcgccgcgagggctaccag
cgtgccgtccgcgctgccggaatcgaagatgatccgcgactgattgcgcagggcgatttc
accttcgagtccggcgaggccgcgacacgagaactgctttcacttccgaacccgccgacc
gcgatcctggcgagcagcggccatatgtcgctggccgcgctcgaagtcgcgaagtcgatg
ggtttcagggttcccgacgatctttcgatcatcagcttcgacgatacgccgatcgtcaag
ttcagcgcgcctccgctgaccgccatccggcagccgattgcagagatgacggcccgcgca
gccgagctgctgatcaaggtcaacatcggggagccagggccgaccaaaacccaaatcgtg
cccttctcgttgatcgttcgtagttccactggaccgctaaaaggttag
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