Sphingomonas sediminicola: H9L14_09320
Help
Entry
H9L14_09320 CDS
T07077
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssed
Sphingomonas sediminicola
Pathway
ssed03420
Nucleotide excision repair
ssed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L14_09320
03430 Mismatch repair
H9L14_09320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssed03400
]
H9L14_09320
Enzymes [BR:
ssed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L14_09320
DNA repair and recombination proteins [BR:
ssed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L14_09320
MMR (mismatch excision repair)
Other MMR factors
H9L14_09320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QNP44926
LinkDB
All DBs
Position
1725155..1727584
Genome browser
AA seq
809 aa
AA seq
DB search
MCSGLWITGILGTTVGTFHDSHESPTLVAVPFPLTYLQPVPDSSADLPDSPDSSREAPWL
AGLNPPQREAVLTTEGPVLVLAGAGTGKTSALTARLANLIATRKAWPSQILAVTFTNKAA
REMKERIARISGGAIEGMPWLGTFHSVAARMLRSHAELVGLQSNFTILDTDDQLRVLKQL
ISAVNLDEKRWPARQLATLIDRWKNRGWTPKEVDLGEAEAFGPGRGRELYAAYQDRLRTL
NACDFGDLLLHMLTIFRTHPDVLESYRDRFRYILVDEYQDTNQSQYAWLKLLAEPRRNLC
CVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIRLEQNYRSTSHILAAADGLIANNAGRL
GKTLWTDKGDGEKVKVVGIWDGPEEARRIGEDVEGMQRRGLSLDDVAILVRAQFQTREFE
ERFIAIGLPYQIIGGFRFYERAEIRDALAYLRLIHQPADDLAFERIVNQPKRGLGDKAIA
TIHAHARASQEPLLIAAAKLLDTDELQSRARSSLGRFVADIARWKQMANELPHAELARIM
LDESGYTAMLQAERSAESAGRLENLAELTRAMEEYESLPAFLEHVSLVMDNDENRQGEKV
TIMTIHAAKGLEFDIVYLPGWEEGIFPSQRALDEGGLASLEEERRLAYVAITRARKKATV
MHAANRRIYGQWTSSLPSRFVGELPEAHIDQETTMSGGESLWRAQWSERADPFAHLGPAQ
GMRAATRGPGWQRASQGGRFNRDPQRVIEAKASAVSLGNQGRTDLELGQRVFHGKFGYGK
IVAQEGNKLEIEFEHAGLKKVLDSFVSAS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcaggcctgtggataacggggatactgggaacaacagtcggaacatttcatgat
tcccacgagtcgcccactttggttgccgttccgttccccctaacctacctccaacccgtg
ccagattcgtccgccgacctgcccgactcgcccgactcgagtcgcgaagccccctggctc
gccggcctgaacccgccgcagcgggaggccgtgcttacgactgagggccccgtgctggtc
ctcgccggcgccggcaccggcaagacctccgccctcaccgctcgcctcgccaacctcatc
gcaacccgcaaggcgtggccgagccagatcctcgccgtcaccttcaccaacaaggccgcg
cgcgagatgaaggagcgcatcgccaggatcagcggcggagcgatcgagggcatgccgtgg
ctcggcaccttccactcggtcgccgcgcgcatgctccgcagccatgccgagctcgtcggc
ctgcagtccaacttcaccatcctcgacaccgacgaccagctccgcgtcctcaagcagctg
atcagcgccgtcaatctcgacgagaagcgctggcccgcgcgtcagctcgccaccctcatc
gatcgctggaagaaccgcggctggactccgaaagaggtcgacctcggcgaagcggaagcg
ttcggccccggccgcggccgcgagctctacgccgcctaccaggaccgcctgcgcaccctg
aacgcctgcgacttcggcgacctcctgctccacatgctgacgatcttccgcacgcacccc
gacgtgctggagagctaccgcgaccgtttccgctacatcctggtcgacgaatatcaggac
accaaccagtcgcagtacgcctggctcaagctccttgccgagccgcgccgcaacctctgc
tgcgtcggcgacgacgaccagtcgatctattcctggcgcggcgcggaggtcgccaacatc
ctccgcttcgaaaaggacttccccggcgcgaaggtcatccgcctggaacagaactaccgc
tccacctcgcacatcctggccgccgccgacggcctcatcgccaacaatgccggccgcctc
ggcaagacactctggaccgacaagggcgacggcgagaaggtcaaggtcgtcggcatctgg
gacggcccggaggaggcgcgccgcatcggcgaggatgtcgagggcatgcagcgccgcggg
ctaagcctcgacgacgtcgccatcctcgtccgcgcccagttccagacgcgcgagttcgaa
gagcgcttcatcgcgatcggcctgccctaccagatcatcggcggcttccgcttctacgaa
cgcgccgagatccgcgacgccctcgcctacctccgcctcatccaccagcccgccgacgac
ctcgcgttcgagcgcatcgtcaaccagcccaagcgcggcctcggcgacaaggcaatcgcc
accatccacgcgcacgcgcgcgcgtctcaggagccgcttctgatcgccgccgccaagctt
ctcgacacggacgagcttcagtcccgcgcccgctctagcctcggccgtttcgtcgccgac
atcgcccgctggaagcagatggcgaacgagcttccccatgccgagctcgcccgcatcatg
ctcgacgaaagcggctataccgccatgctccaggccgagcgcagcgcggaatccgccggc
cgcctcgaaaacctcgccgagctcacccgcgcgatggaggaatatgaaagcctccctgcc
ttcctcgaacacgtcagcctcgtcatggacaatgacgagaaccggcagggcgagaaggtc
accatcatgaccatccacgccgccaaggggctggagttcgacatcgtctatttgcccggc
tgggaggaaggtatcttcccgtcgcagcgcgcgctcgacgaaggcggcctcgccagcctc
gaggaggaacgccgcctcgcctacgtcgccatcacccgcgcgcggaaaaaggcgacggtg
atgcacgccgccaaccggcgcatctacggccagtggaccagctccctccccagccgcttc
gtcggcgagcttcccgaagcgcatatcgatcaggaaacgaccatgtccggcggcgagagc
ctgtggcgcgcgcaatggagcgagcgcgccgatcccttcgctcacctcggccccgcgcaa
ggcatgcgagccgcgacccgcggccccggctggcagcgcgcgagccagggcggccgcttc
aaccgcgacccccagcgcgtgatcgaagccaaggcgtctgcggtgtcgctaggcaaccag
ggacggacggacctggagctcggccagcgcgtgttccacggcaagttcggctacggcaag
atcgtcgcgcaggaaggcaacaagctcgagatcgagtttgagcatgcggggttgaagaag
gttttggattctttcgtcagcgcctcttag
DBGET
integrated database retrieval system
