Shewanella seohaensis: N7V09_00380
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Entry
N7V09_00380 CDS
T08778
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00300
Lysine biosynthesis
sseh00470
D-Amino acid metabolism
sseh01100
Metabolic pathways
sseh01110
Biosynthesis of secondary metabolites
sseh01120
Microbial metabolism in diverse environments
sseh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N7V09_00380 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N7V09_00380 (dapF)
Enzymes [BR:
sseh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N7V09_00380 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
UXM82203
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All DBs
Position
complement(86440..87267)
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AA seq
275 aa
AA seq
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MIQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGVGFDQLLLVEPPYDPDLDFH
YRIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMG
VPVLDPSQIPFKAKKAEKTYLLQTSQQTFLCGAASMGNPHCVLDVEDVANANVAEIGALL
TKHERFPRGVNVGFMQVVNSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVR
VDLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgatccaattcactaagatgcacggactgggcaacgattttatggtggtcgatggtgtc
acgcagaacgtgttcttttcgcctgagcagatccgccgtttagccgaccgtaactttggt
gtcggtttcgatcaacttttactggttgagccgccctatgatcccgatttggattttcac
tatcgtatctttaatgccgacggtggtgaggtcgaaaactgtggcaatggcgcccgttgt
tttgcgcgctttgttcgtaataaagggctgacgaataagaataaaattcgtgtaagcacc
tcggcgggtaagatgactctgcgcctcgaacgtgacggcactgtcactgttaatatgggc
gtgcctgtgctcgatcctagccaaattcctttcaaagccaagaaggccgaaaaaacctat
ctgctgcaaacgtcgcaacaaacgtttttatgtggcgcggcgtcgatgggtaatccccat
tgcgtgctcgatgtggaagatgttgctaacgctaatgtcgccgagattggtgcactactc
actaaacatgaacgctttccgcgcggggtaaacgtcggctttatgcaggtggtgaactcg
ggccatattaagcttagagtttacgagcgtggtgcggccgagaccttagcctgtggcaca
ggggcttgtgccgctgtggtggtagggcagatccaaggcaaactcgaccaacaggtacgt
gtagacttgccgggtggcaccttaaccatcaattgggaaggtgaaggcaaacccctgtgg
atgacggggccagcgcagcacgtttacgatggacaaattcagttatga
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