Shewanella seohaensis: N7V09_01550
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Entry
N7V09_01550 CDS
T08778
Symbol
birA
Name
(GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sseh
Shewanella seohaensis
Pathway
sseh00780
Biotin metabolism
sseh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
N7V09_01550 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sseh03000
]
N7V09_01550 (birA)
Enzymes [BR:
sseh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
N7V09_01550 (birA)
Transcription factors [BR:
sseh03000
]
Prokaryotic type
Helix-turn-helix
Other families
N7V09_01550 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
Rrf2
HTH_5
HTH_20
MarR_2
MarR
Fe_dep_repress
HTH_28
HTH_10
HVO_A0114
HTH_Crp_2
HVO_A0261_N
BPL_LplA_LipB_2
HTH_1
PF0610-like_N
HTH_36
HTH_34
HTH_DeoR
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UXM82390
LinkDB
All DBs
Position
complement(315764..316723)
Genome browser
AA seq
319 aa
AA seq
DB search
MSDNWMRKREILGLLSSEHFVSGEELATQLGISRAAVSKHVDALEDYGVAIYSVKGRGYK
LANPISLIDSTRLIQSIDNRCFYFDEIPSTNGFMLSHTGELKSGDLCVAEYQSAGRGRRG
RTWVSPYGHHLYFSQFWSFPQGMAQAMGLSLVVACSLVEVLKSFGVDNIGVKWPNDIYLN
YKKLAGILIEMSGQADSECQLIIGIGVNMAMSEDQGKGIDQPWSDLSALATMPNKTDLVI
ALQKQLKKDIQLFEREGLAAFKMRWQAADLFYGKEIRLLMGENHVEGICRGVDEQGAVVL
ETADGTQAYIGGEISLRPR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataactggatgagaaaacgcgaaatactgggattactgtcgagcgaacatttt
gtctcgggtgaagagttggcgacacaactgggtatttctcgtgcggcggtgagcaagcat
gtcgatgctttggaagactatggcgtggcgatttacagtgtcaaaggtcgtggttacaaa
ttagcgaaccccatctctcttatcgactcgactcggttaattcagtcgattgataatcgt
tgcttttattttgatgagatcccaagcaccaacggttttatgttaagccatacgggtgag
cttaagagtggcgacctgtgtgtcgcggaatatcagtcggcaggacgaggtcgccgtggc
cgtacttgggtttctccctatgggcatcatttatatttctcgcagttttggtcattcccc
caagggatggcgcaggcaatgggcttaagccttgttgtggcttgtagcttagtcgaggta
ttgaagtcctttggcgtggataatatcggcgtgaaatggccaaacgatatttaccttaat
tataaaaagcttgctggaattttaattgagatgtcaggtcaggcggatagcgagtgccaa
ttgatcattggtattggtgtcaacatggccatgtcggaagaccaaggaaaaggtatagat
cagccttggagcgatctatccgccttagcgactatgccaaataaaacggatctcgtgatt
gcgctgcaaaagcagcttaagaaagatattcaactatttgagcgcgaaggattagcagca
ttcaaaatgcgttggcaagcggctgatttattctatggcaaagagatccgtctactcatg
ggtgaaaatcatgttgagggtatttgccgcggcgtcgacgaacagggtgcagtagtactt
gaaaccgccgatggcacacaggcatacatcggcggcgaaatcagtttaaggccgagatag
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